RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SLC6A15Q9H2J7 730 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 NLRC4Q9NPP4 1024 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ARMC1Q9NVT9 282 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 FKBP14Q9NWM8 211 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PHF11Q9UIL8 331 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ADAM30Q9UKF2 790 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 QRICH2Q9H0J4 1663 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TEX51A0A1B0GUA7 166 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DPPA5A6NC42 116 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM64CA6NLI5 447 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PHF20L1A8MW92 1017 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 FADS2P1A8MWK0 482 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 F8W810 466 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DNALI1O14645 258 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ZSCAN9O15535 394 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ADCY6O43306 1168 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SYNCRIPO60506 623 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 UBOX5O94941 541 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TJP3O95049 919 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 EYA4O95677 639 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CSB-PGBD3P0DP91 1061 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CA4P22748 312 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 F8A1P23610 371 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 GNA11P29992 359 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM23P36406 574 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SLC1A1P43005 524 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 HNRNPFP52597 415 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 NFE2L1Q14494 772 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 NR1D2Q14995 579 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 UAP1Q16222 522 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 CLPPQ16740 277 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ZNF423Q2M1K9 1284 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 EDRF1Q3B7T1 1238 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SLC45A4Q5BKX6 768 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 LRRC8EQ6NSJ5 796 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TTC23LQ6PF05 361 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 FOXR1Q6PIV2 292 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM67Q6ZTA4 783 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 KRT25Q7Z3Z0 450 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 LRRC6Q86X45 466 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ZNF354CQ86Y25 554 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 KRT73Q86Y46 540 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CCDC36Q8IYA8 594 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 LRRC34Q8IZ02 419 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 STAG2Q8N3U4 1231 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SPERTQ8NA61 448 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 NSUN7Q8NE18 718 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ACTRT1Q8TDG2 376 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 FNIP1Q8TF40 1166 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MAML1Q92585 1016 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MAP4K1Q92918 833 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PPWD1Q96BP3 646 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 SPATA17Q96L03 361 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 CSRNP1Q96S65 589 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 DNAJC7Q99615 494 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 MEIS3Q99687 375 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 AIFM2Q9BRQ8 373 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 LRRC1Q9BTT6 524 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 FRMD8P1Q9BZ68 369 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 DDX47Q9H0S4 455 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 GGNBP2Q9H3C7 697 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SNX25Q9H3E2 840 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 BOLA2Q9H3K6 86 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 ING3Q9NXR8 418 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SLAIN2Q9P270 581 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 PPARGC1AQ9UBK2 798 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 DBF4Q9UBU7 674 aaPredicted RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 TRIM10Q9UDY6 481 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 WARS2Q9UGM6 360 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 ZNF221Q9UK13 617 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 KLHL20Q9Y2M5 609 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 COQ6Q9Y2Z9 468 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 TTLL3Q9Y4R7 772 aa2.33□□□□□ -2.04
USP53-202ENST00000450251 SRPRBQ9Y5M8 271 aaKnown RBP2.33□□□□□ -2.04
USP53-202ENST00000450251 STRCQ7RTU9 1775 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TEX28O15482 410 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 FARP2O94887 1054 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 LDHAP00338 332 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 ALADP13716 330 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 UQCRBP14927 111 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 NSFP46459 744 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 PLTPP55058 493 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 IGBP1P78318 339 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 EHHADHQ08426 723 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 KCNA1Q09470 495 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ILF2Q12905 390 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 THOC5Q13769 683 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 ARID5BQ14865 1188 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TRADDQ15628 312 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TRIP10Q15642 601 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 RABL6Q3YEC7 729 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 AASDHQ4L235 1098 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 ZC2HC1CQ53FD0 456 aaPredicted RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 FIGNQ5HY92 759 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ERMARDQ5T6L9 678 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ARL6IP4Q66PJ3 421 aaKnown RBP2.32□□□□□ -2.04
USP53-202ENST00000450251 SCARA3Q6AZY7 606 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 PLEKHA7Q6IQ23 1121 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 ZNF544Q6NX49 715 aa2.32□□□□□ -2.04
USP53-202ENST00000450251 TTC33Q6PID6 262 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms