RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 NR2E1Q9Y466 385 aa13.58□□□□□ -0.24
MSH5-209ENST00000450148 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.24
MSH5-209ENST00000450148 MYH15Q9Y2K3 1946 aa13.58□□□□□ -0.24
MSH5-209ENST00000450148 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 TMEM221A6NGB7 291 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 TMEM189-UBE2V1I3L0A0 370 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 M0R296 226 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 SLC26A4O43511 780 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 TGM5O43548 720 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 TADA2AO75478 443 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 GLUD1P00367 558 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 PLS3P13797 630 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 RPL17P18621 184 aaKnown RBP13.57□□□□□ -0.24
MSH5-209ENST00000450148 SOX4Q06945 474 aaPredicted RBP13.57□□□□□ -0.24
MSH5-209ENST00000450148 SIGLEC14Q08ET2 396 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 PTPAQ15257 358 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 SF3A1Q15459 793 aaKnown RBP13.57□□□□□ -0.24
MSH5-209ENST00000450148 PRSS55Q6UWB4 352 aaPredicted RBP13.57□□□□□ -0.24
MSH5-209ENST00000450148 ZDHHC14Q8IZN3 488 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 LNX1Q8TBB1 728 aaPredicted RBP13.57□□□□□ -0.24
MSH5-209ENST00000450148 HDAC7Q8WUI4 952 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 RIN2Q8WYP3 895 aaPredicted RBP13.57□□□□□ -0.24
MSH5-209ENST00000450148 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 ZNF707Q96C28 371 aaPredicted RBP13.57□□□□□ -0.24
MSH5-209ENST00000450148 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
MSH5-209ENST00000450148 CLSTN3Q9BQT9 956 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 KCND2Q9NZV8 630 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 NOTCH4Q99466 2003 aa13.57□□□□□ -0.24
MSH5-209ENST00000450148 SF3B1O75533 1304 aaKnown RBP eCLIP13.57□□□□□ -0.245e-9■■■■■ 30
MSH5-209ENST00000450148 SMIM28A0A1B0GU29 152 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 N4BP1O75113 896 aaKnown RBP13.56□□□□□ -0.24
MSH5-209ENST00000450148 RFPL2O75678 378 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 BMP15O95972 392 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 SPATA31D3P0C874 917 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 MAPTP10636 758 aaKnown RBP13.56□□□□□ -0.24
MSH5-209ENST00000450148 MCF2P10911 925 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
MSH5-209ENST00000450148 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 FAM171A1Q5VUB5 890 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 MPZL3Q6UWV2 235 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 SPATA31D4Q6ZUB0 917 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 PALB2Q86YC2 1186 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 GLYCTKQ8IVS8 523 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 C3orf58Q8NDZ4 430 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 HAPLN2Q9GZV7 340 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 GOLGA2P5Q9HBQ8 144 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 ANK1P16157 1881 aa13.56□□□□□ -0.24
MSH5-209ENST00000450148 TRIOO75962 3097 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 CCDC195A0A1B0GUA6 201 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 VPS37CA5D8V6 355 aaPredicted RBP13.55□□□□□ -0.24
MSH5-209ENST00000450148 ADAM12O43184 909 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 ASGR2P07307 311 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 MYBP10242 640 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 FGFR3P22607 806 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 LONP1P36776 959 aaKnown RBP13.55□□□□□ -0.24
MSH5-209ENST00000450148 CLCNKBP51801 687 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 NCKAP1LP55160 1127 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 OSTNP61366 133 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 RESTQ13127 1097 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 KARSQ15046 597 aaKnown RBP13.55□□□□□ -0.24
MSH5-209ENST00000450148 UPP1Q16831 310 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 USP49Q70CQ1 688 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 ZBTB33Q86T24 672 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 TDRD5Q8NAT2 981 aaKnown RBP13.55□□□□□ -0.24
MSH5-209ENST00000450148 KREMEN2Q8NCW0 462 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 CDK5RAP3Q96JB5 506 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 SNX27Q96L92 541 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 FIZ1Q96SL8 496 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 REEP2Q9BRK0 252 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 TTPALQ9BTX7 342 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 SMOC2Q9H3U7 446 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 PLEKHA4Q9H4M7 779 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 LIMD1Q9UGP4 676 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 ODF2LQ9ULJ1 636 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 SORCS3Q9UPU3 1222 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
MSH5-209ENST00000450148 TOM1L1O75674 476 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 KCNE1P15382 129 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 PLCG1P19174 1290 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 SYT1P21579 422 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 UBA7P41226 1012 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 ZNF131P52739 623 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 MCM6Q14566 821 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 PSMD5Q16401 504 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 SLC10A6Q3KNW5 377 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 FAM173BQ6P4H8 233 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 CYP26C1Q6V0L0 522 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.54□□□□□ -0.24
MSH5-209ENST00000450148 CCDC149Q6ZUS6 474 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 APBB1IPQ7Z5R6 666 aaPredicted RBP13.54□□□□□ -0.24
MSH5-209ENST00000450148 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 FAM122AQ96E09 287 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 INTS4Q96HW7 963 aaKnown RBP13.54□□□□□ -0.24
MSH5-209ENST00000450148 MFSD14AQ96MC6 490 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms