RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 CACNA1HO95180 2353 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 TMEM189-UBE2V1I3L0A0 370 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 CD2BP2O95400 341 aaKnown RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 PDGFBP01127 241 aaPredicted RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 SPATA31D3P0C874 917 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 MYBP10242 640 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 RPL17P18621 184 aaKnown RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 GUCY2CP25092 1073 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 AVPR2P30518 371 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 GRM5P41594 1212 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 NUBP1P53384 320 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 YARSP54577 528 aaKnown RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 VCPP55072 806 aaKnown RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 MAPK7Q13164 816 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 ZRSR1Q15695 479 aaKnown RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 PSMD5Q16401 504 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 ZNF568Q3ZCX4 644 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 HYIQ5T013 277 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 IER5LQ5T953 404 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 ARL6IP4Q66PJ3 421 aaKnown RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 DCLRE1AQ6PJP8 1040 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 SPATA31D4Q6ZUB0 917 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 C1orf186Q6ZWK4 172 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 KCNK18Q7Z418 384 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 GLYCTKQ8IVS8 523 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 CDK5RAP3Q96JB5 506 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 UROC1Q96N76 676 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 PPP1R10Q96QC0 940 aaKnown RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 ACO2Q99798 780 aaKnown RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 PRKD2Q9BZL6 878 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 CDT1Q9H211 546 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 CXCL16Q9H2A7 254 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 PIDD1Q9HB75 910 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 IGSF9Q9P2J2 1179 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 KCNG1Q9UIX4 513 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
SRRT-205ENST00000449389 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.87□□□□□ -0.51
SRRT-205ENST00000449389 VWA3AA6NCI4 1184 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 SLC26A4O43511 780 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 ZMYND10O75800 440 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 MCF2P10911 925 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 GBP2P32456 591 aaPredicted RBP11.86□□□□□ -0.51
SRRT-205ENST00000449389 TDGQ13569 410 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 GLRA4Q5JXX5 417 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 LIN9Q5TKA1 542 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 TAS1R3Q7RTX0 852 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 ALYREFQ86V81 257 aaKnown RBP11.86□□□□□ -0.51
SRRT-205ENST00000449389 CEP57Q86XR8 500 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 SYT2Q8N9I0 419 aaPredicted RBP11.86□□□□□ -0.51
SRRT-205ENST00000449389 LNX1Q8TBB1 728 aaPredicted RBP11.86□□□□□ -0.51
SRRT-205ENST00000449389 SPIRE2Q8WWL2 714 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 PNMA5Q96PV4 448 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 NTPCRQ9BSD7 190 aaKnown RBP11.86□□□□□ -0.51
SRRT-205ENST00000449389 TCHPQ9BT92 498 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
SRRT-205ENST00000449389 IRF2BPLQ9H1B7 796 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 SMOC2Q9H3U7 446 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 KCNK12Q9HB15 430 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 PTPRHQ9HD43 1115 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 SLC38A7Q9NVC3 462 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 KCND2Q9NZV8 630 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 EPS15L1Q9UBC2 864 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 FBXW11Q9UKB1 542 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 PLXNA3P51805 1871 aa11.86□□□□□ -0.51
SRRT-205ENST00000449389 SMIM28A0A1B0GU29 152 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 SLC16A4O15374 487 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 TRAPPC3O43617 180 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 N4BP1O75113 896 aaKnown RBP11.85□□□□□ -0.51
SRRT-205ENST00000449389 B3GAT3O94766 335 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 HNRNPA1P09651 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
SRRT-205ENST00000449389 PLS3P13797 630 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 FGFR3P22607 806 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 PROZP22891 400 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 MRE11P49959 708 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 CLCNKBP51801 687 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 SMTNP53814 917 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 STRN3Q13033 797 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 TMEM119Q4V9L6 283 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 XKR4Q5GH76 650 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
SRRT-205ENST00000449389 MPZL3Q6UWV2 235 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 CEP120Q8N960 986 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
SRRT-205ENST00000449389 SNX27Q96L92 541 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 AK8Q96MA6 479 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 TBC1D32Q96NH3 1257 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 ACAP3Q96P50 834 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 CLSTN3Q9BQT9 956 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 MFSD1Q9H3U5 465 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.85□□□□□ -0.51
SRRT-205ENST00000449389 DUSP12Q9UNI6 340 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 MYO10Q9HD67 2058 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 C2orf16Q68DN1 1984 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 KMT2EQ8IZD2 1858 aa11.85□□□□□ -0.51
SRRT-205ENST00000449389 SFI1A8K8P3 1242 aa11.84□□□□□ -0.51
SRRT-205ENST00000449389 H0YCG3 227 aa11.84□□□□□ -0.51
SRRT-205ENST00000449389 ABLIM1O14639 778 aa11.84□□□□□ -0.51
SRRT-205ENST00000449389 TOM1L1O75674 476 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms