RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 GLRA4Q5JXX5 417 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 ZNF280BQ86YH2 543 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 URGCPQ8TCY9 931 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 CLP1Q92989 425 aaKnown RBP11.6□□□□□ -0.55
SMPD4-211ENST00000449159 SNX27Q96L92 541 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 CCDC94Q9BW85 323 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-211ENST00000449159 NUP62CLQ9H1M0 184 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 KCTD10Q9H3F6 313 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 PCIF1Q9H4Z3 704 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 UBN1Q9NPG3 1134 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 AGPAT3Q9NRZ7 376 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 RMND1Q9NWS8 449 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 CACNG4Q9UBN1 327 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
SMPD4-211ENST00000449159 AGO2Q9UKV8 859 aaKnown RBP11.6□□□□□ -0.55
SMPD4-211ENST00000449159 GOLGA8IPA6NC78 632 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 GOLGA8JA6NMD2 632 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 CLIC2O15247 247 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 ZC3H11AO75152 810 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 DDHD2O94830 711 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 GARTP22102 1010 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 CTNNB1P35222 781 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 CYP2J2P51589 502 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 ERVK-21P61565 698 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 RNASELQ05823 741 aaKnown RBP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 KNOP1Q1ED39 458 aaKnown RBP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 SLC10A6Q3KNW5 377 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 EPC2Q52LR7 807 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 ZNF658Q5TYW1 1059 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 SLFN12LQ6IEE8 588 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 ARMCX5Q6P1M9 558 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 CRELD2Q6UXH1 353 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 ALKAL1Q6UXT8 129 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 TMEM130Q8N3G9 435 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 ARNTL2Q8WYA1 636 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 ZMAT2Q96NC0 199 aaKnown RBP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 ACAP3Q96P50 834 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 TGS1Q96RS0 853 aaKnown RBP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 RPS6KC1Q96S38 1066 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 MRPL9Q9BYD2 267 aaKnown RBP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 NRDE2Q9H7Z3 1164 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 HSPBP1Q9NZL4 362 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 KIAA1468Q9P260 1216 aa11.59□□□□□ -0.55
SMPD4-211ENST00000449159 CPSF3Q9UKF6 684 aaKnown RBP11.59□□□□□ -0.55
SMPD4-211ENST00000449159 RFXAPO00287 272 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 MBD3O95983 291 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 CLTAP09496 248 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 CD44P16070 742 aaKnown RBP11.58□□□□□ -0.56
SMPD4-211ENST00000449159 PLA2G5P39877 138 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 PRCPP42785 496 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 YARSP54577 528 aaKnown RBP11.58□□□□□ -0.56
SMPD4-211ENST00000449159 WNT7BP56706 349 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 SPAG1Q07617 926 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 DSC1Q08554 894 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 GRIK3Q13003 919 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 MORC3Q14149 939 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 NAB2Q15742 525 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 SPOUT1Q5T280 376 aaKnown RBP11.58□□□□□ -0.56
SMPD4-211ENST00000449159 HS2ST1Q7LGA3 356 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 TMEM173Q86WV6 379 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-211ENST00000449159 GUF1Q8N442 669 aaKnown RBP11.58□□□□□ -0.56
SMPD4-211ENST00000449159 COLGALT1Q8NBJ5 622 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 GDPD5Q8WTR4 605 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 NOC3LQ8WTT2 800 aaKnown RBP11.58□□□□□ -0.56
SMPD4-211ENST00000449159 RABGGTAQ92696 567 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 PPP1R10Q96QC0 940 aaKnown RBP11.58□□□□□ -0.56
SMPD4-211ENST00000449159 PAAF1Q9BRP4 392 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 FAM213AQ9BRX8 229 aa11.58□□□□□ -0.56
SMPD4-211ENST00000449159 TOPORSQ9NS56 1045 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-211ENST00000449159 SCN1AP35498 2009 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 SMIM28A0A1B0GU29 152 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 TTC26A0AVF1 554 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 LACTBL1A8MY62 500 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 NT5C1B-RDH14C9J2C7 533 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 F8W810 466 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 ADRB2P07550 413 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 BMPR1AP36894 532 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 SLC11A1P49279 550 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 BCAR1P56945 870 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 TFF2Q03403 129 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 SOX4Q06945 474 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-211ENST00000449159 SKIV2LQ15477 1246 aaKnown RBP11.57□□□□□ -0.56
SMPD4-211ENST00000449159 XKR4Q5GH76 650 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 KCNT2Q6UVM3 1135 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 CBWD2Q8IUF1 395 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 COLGALT2Q8IYK4 626 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 GPD1LQ8N335 351 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 FBXO22Q8NEZ5 403 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 BCL7CQ8WUZ0 217 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-211ENST00000449159 C18orf25Q96B23 403 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-211ENST00000449159 FAM212AQ96EL1 285 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 FAM84AQ96KN4 292 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 NECAB3Q96P71 396 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-211ENST00000449159 RPF1Q9H9Y2 349 aaKnown RBP11.57□□□□□ -0.56
SMPD4-211ENST00000449159 GOLGA2P5Q9HBQ8 144 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 CNTN3Q9P232 1028 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 RAPGEFL1Q9UHV5 662 aa11.57□□□□□ -0.56
SMPD4-211ENST00000449159 VWA8A3KMH1 1905 aa11.56□□□□□ -0.56
SMPD4-211ENST00000449159 TRIM49BA6NDI0 452 aa11.56□□□□□ -0.56
SMPD4-211ENST00000449159 CASTOR2A6NHX0 329 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms