RNA–Protein interactions for RNA: ENST00000448893.1

RHBDF1-205, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-205ENST00000448893 RETP07949 1114 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 TDGF1P13385 188 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 OR1D2P34982 312 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 ARL2P36404 184 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 CCT2P78371 535 aaKnown RBP13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 TUSC3Q13454 348 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 PSMD5Q16401 504 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 PABPC1LQ4VXU2 614 aaKnown RBP13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 PPM1JQ5JR12 505 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 TANGO2Q6ICL3 276 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 PPP4R3AQ6IN85 833 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 SLC27A1Q6PCB7 646 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 SLC7A14Q8TBB6 771 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 NETO1Q8TDF5 533 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 KCNB2Q92953 911 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 ZSWIM4Q9H7M6 989 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 RAB23Q9ULC3 237 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 CHD8Q9HCK8 2581 aa13.4□□□□□ -0.26
RHBDF1-205ENST00000448893 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 B4GALT5O43286 388 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 NPTXRO95502 500 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 EVCP57679 992 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 SSRP1Q08945 709 aaKnown RBP13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 NPY5RQ15761 445 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 LPAL2Q16609 132 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 INF2Q27J81 1249 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 LAIR1Q6GTX8 287 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 GALNT17Q6IS24 598 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 DAGLBQ8NCG7 672 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 HASPINQ8TF76 798 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 ING5Q8WYH8 240 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 HAS1Q92839 578 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 ELSPBP1Q96BH3 223 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 DYDC2Q96IM9 177 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 LXNQ9BS40 222 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 NFKBIZQ9BYH8 718 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 NCOA5Q9HCD5 579 aaKnown RBP13.39□□□□□ -0.27
RHBDF1-205ENST00000448893 CASTOR2A6NHX0 329 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 LRP3O75074 770 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 KIF4AO95239 1232 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 THP07101 528 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 CENPBP07199 599 aaPredicted RBP13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 RHOP08100 348 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 ELAVL2Q12926 359 aaKnown RBP13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 CAPSQ13938 189 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 PPP2R5DQ14738 602 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 BLOC1S2Q6QNY1 142 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 KRT25Q7Z3Z0 450 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 TPH2Q8IWU9 490 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 ASAP3Q8TDY4 903 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 JAKMIP1Q96N16 626 aaKnown RBP13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 CHRDQ9H2X0 955 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 AVENQ9NQS1 362 aaPredicted RBP13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 SEMA4GQ9NTN9 838 aa13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 NDRG2Q9UN36 371 aaKnown RBP13.38□□□□□ -0.27
RHBDF1-205ENST00000448893 ARID2Q68CP9 1835 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 ZMYM2Q9UBW7 1377 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 PTGESO14684 152 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 TBX3O15119 743 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 HRO43593 1189 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 MARCH6O60337 910 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 DEXIO95424 95 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 PTPN2P17706 415 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 FGFR3P22607 806 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 GLRA2P23416 452 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 RPS6KB1P23443 525 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 NAB2Q15742 525 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 CSRP2Q16527 193 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 FAM177A1Q8N128 213 aaPredicted RBP13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 DNASE1L2Q92874 299 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 HSD17B14Q9BPX1 270 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 IER2Q9BTL4 223 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 CXCL16Q9H2A7 254 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 BRD9Q9H8M2 597 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 ANKEF1Q9NU02 776 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 MAP1BP46821 2468 aaKnown RBP13.37□□□□□ -0.27
RHBDF1-205ENST00000448893 GDF9O60383 454 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 CCNT1O60563 726 aaKnown RBP13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 DGAT1O75907 488 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 IGFBP6P24592 240 aaPredicted RBP13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 CXCL12P48061 93 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 CCR3P51677 355 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 SPIRE1Q08AE8 756 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 SIM2Q14190 667 aaPredicted RBP13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 BMP2KLQ5H9B9 411 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 NCAPH2Q6IBW4 605 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 PRR23BQ6ZRT6 265 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 NEK8Q86SG6 692 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 ZNF461Q8TAF7 563 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 FAM3CQ92520 227 aa13.36□□□□□ -0.27
RHBDF1-205ENST00000448893 FZD8Q9H461 694 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms