RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 MYOGP15173 224 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 RPL13P26373 211 aaKnown RBP12.89□□□□□ -0.35
RCL1-208ENST00000448872 BMP8BP34820 402 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 SCNN1GP51170 649 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
RCL1-208ENST00000448872 ZNF445P59923 1031 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 MYBPC2Q14324 1141 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 NCAPHQ15003 741 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 ALKAL1Q6UXT8 129 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 FAM43BQ6ZT52 329 aaPredicted RBP12.89□□□□□ -0.35
RCL1-208ENST00000448872 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 BRSK2Q8IWQ3 736 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 DHX40Q8IX18 779 aaKnown RBP12.89□□□□□ -0.35
RCL1-208ENST00000448872 HACE1Q8IYU2 909 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 AOPEPQ8N6M6 819 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 ENOX1Q8TC92 643 aaKnown RBP12.89□□□□□ -0.35
RCL1-208ENST00000448872 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 POP1Q99575 1024 aaKnown RBP12.89□□□□□ -0.35
RCL1-208ENST00000448872 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
RCL1-208ENST00000448872 PDE11AQ9HCR9 933 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 CACNG4Q9UBN1 327 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 GIT1Q9Y2X7 761 aa12.89□□□□□ -0.35
RCL1-208ENST00000448872 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 TTC26A0AVF1 554 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 LCHNA4D1U4 455 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
RCL1-208ENST00000448872 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
RCL1-208ENST00000448872 NFICP08651 508 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 ZNF165P49910 485 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 DLG4P78352 724 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 CYP24A1Q07973 514 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 SPATA1Q5VX52 437 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 LMBRD2Q68DH5 695 aaPredicted RBP12.88□□□□□ -0.35
RCL1-208ENST00000448872 SCARA3Q6AZY7 606 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 JADE1Q6IE81 842 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 GLB1LQ6UWU2 654 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 FAM186BQ8IYM0 893 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 TDHQ8IZJ6 230 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 C18orf25Q96B23 403 aaPredicted RBP12.88□□□□□ -0.35
RCL1-208ENST00000448872 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
RCL1-208ENST00000448872 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 MFSD14AQ96MC6 490 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 SLC9A7Q96T83 725 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 TSPY26PQ9H489 355 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
RCL1-208ENST00000448872 CBX8Q9HC52 389 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
RCL1-208ENST00000448872 SAMSN1Q9NSI8 373 aaKnown RBP12.88□□□□□ -0.35
RCL1-208ENST00000448872 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 FRMD4BQ9Y2L6 1034 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 NFE2L3Q9Y4A8 694 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 TET1Q8NFU7 2136 aa12.88□□□□□ -0.35
RCL1-208ENST00000448872 SMIM28A0A1B0GU29 152 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 ARHGEF15O94989 841 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 DLATP10515 647 aaKnown RBP12.87□□□□□ -0.35
RCL1-208ENST00000448872 PSMC2P35998 433 aaKnown RBP12.87□□□□□ -0.35
RCL1-208ENST00000448872 PBX2P40425 430 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 GUCY2FP51841 1108 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 MYL5Q02045 173 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 PPP2R3AQ06190 1150 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 KYAT1Q16773 422 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 TPD52L1Q16890 204 aaPredicted RBP12.87□□□□□ -0.35
RCL1-208ENST00000448872 XKR4Q5GH76 650 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 NOMO2Q5JPE7 1267 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 CT47A1Q5JQC4 288 aaPredicted RBP12.87□□□□□ -0.35
RCL1-208ENST00000448872 C1orf220Q5T0J3 134 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 FOXR2Q6PJQ5 311 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 LUZP1Q86V48 1076 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 ZNF280BQ86YH2 543 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 EFCAB13Q8IY85 973 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 ABI1Q8IZP0 508 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 PHOSPHO2Q8TCD6 241 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 CEP63Q96MT8 703 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 YME1L1Q96TA2 773 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
RCL1-208ENST00000448872 TMEM117Q9H0C3 514 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 HSD3B7Q9H2F3 369 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 KIAA1586Q9HCI6 787 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 UBN1Q9NPG3 1134 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 TBC1D13Q9NVG8 400 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 FANCLQ9NW38 375 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 TUBGCP4Q9UGJ1 667 aa12.87□□□□□ -0.35
RCL1-208ENST00000448872 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
RCL1-208ENST00000448872 INPPL1O15357 1258 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 SLC16A3O15427 465 aaKnown RBP12.86□□□□□ -0.35
RCL1-208ENST00000448872 TLL1O43897 1013 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 DDHD2O94830 711 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 EPB41P11171 864 aaKnown RBP12.86□□□□□ -0.35
RCL1-208ENST00000448872 IGFBP6P24592 240 aaPredicted RBP12.86□□□□□ -0.35
RCL1-208ENST00000448872 HTRA4P83105 476 aaPredicted RBP12.86□□□□□ -0.35
RCL1-208ENST00000448872 SOX4Q06945 474 aaPredicted RBP12.86□□□□□ -0.35
RCL1-208ENST00000448872 PSMD6Q15008 389 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 IQCB1Q15051 598 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 NAB2Q15742 525 aa12.86□□□□□ -0.35
RCL1-208ENST00000448872 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms