RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 SLC12A3P55017 1021 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 OSTNP61366 133 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 SIGLEC14Q08ET2 396 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 GLRA4Q5JXX5 417 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 FAM171A1Q5VUB5 890 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 GLYCTKQ8IVS8 523 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 CMASQ8NFW8 434 aaPredicted RBP21.6■■□□□ 1.05
VCP-203ENST00000448530 HDAC7Q8WUI4 952 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 PBXIP1Q96AQ6 731 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 UROC1Q96N76 676 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 NTPCRQ9BSD7 190 aaKnown RBP21.6■■□□□ 1.05
VCP-203ENST00000448530 TTPALQ9BTX7 342 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 PLEKHA4Q9H4M7 779 aa21.6■■□□□ 1.05
VCP-203ENST00000448530 LARSQ9P2J5 1176 aaKnown RBP21.6■■□□□ 1.05
VCP-203ENST00000448530 CCDC195A0A1B0GUA6 201 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 H0YCG3 227 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 C1RP00736 705 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 SPATA31D3P0C874 917 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 HARSP12081 509 aaKnown RBP21.59■■□□□ 1.05
VCP-203ENST00000448530 SF3A1Q15459 793 aaKnown RBP21.59■■□□□ 1.05
VCP-203ENST00000448530 NAB2Q15742 525 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 PDXDC1Q6P996 788 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 MPZL3Q6UWV2 235 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 CYP26C1Q6V0L0 522 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 SPATA31D4Q6ZUB0 917 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 OTOP3Q7RTS5 596 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 ZDHHC14Q8IZN3 488 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 BACH2Q9BYV9 841 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 CXCL16Q9H2A7 254 aa21.59■■□□□ 1.05
VCP-203ENST00000448530 MTCL1Q9Y4B5 1905 aaKnown RBP21.59■■□□□ 1.05
VCP-203ENST00000448530 DENND4AQ7Z401 1863 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 C2orf16Q68DN1 1984 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 B3GAT3O94766 335 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 MYBP10242 640 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 RPL17P18621 184 aaKnown RBP21.58■■□□□ 1.05
VCP-203ENST00000448530 MTMR3Q13615 1198 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 DHX8Q14562 1220 aaKnown RBP21.58■■□□□ 1.05
VCP-203ENST00000448530 RTP2Q5QGT7 225 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 PRSS55Q6UWB4 352 aaPredicted RBP21.58■■□□□ 1.05
VCP-203ENST00000448530 TAS1R3Q7RTX0 852 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 BMP8AQ7Z5Y6 402 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 GPBP1Q86WP2 473 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 CEP120Q8N960 986 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 KREMEN2Q8NCW0 462 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 ACAP3Q96P50 834 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 PPP1R10Q96QC0 940 aaKnown RBP21.58■■□□□ 1.05
VCP-203ENST00000448530 PTPRHQ9HD43 1115 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 SLC38A7Q9NVC3 462 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 ANKFY1Q9P2R3 1169 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 SORCS3Q9UPU3 1222 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 MYO10Q9HD67 2058 aa21.58■■□□□ 1.05
VCP-203ENST00000448530 CITO14578 2027 aa21.58■■□□□ 1.04
VCP-203ENST00000448530 NPHP3-ACAD11A0A0J9YXS1 232 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 SMIM28A0A1B0GU29 152 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 TGM5O43548 720 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 TRAPPC3O43617 180 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 TOM1L1O75674 476 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 KRT18P05783 430 aaKnown RBP21.57■■□□□ 1.04
VCP-203ENST00000448530 MATR3P43243 847 aaKnown RBP eCLIP21.57■■□□□ 1.048e-9■■■■■ 35.3
VCP-203ENST00000448530 PSMD5Q16401 504 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 DCLRE1AQ6PJP8 1040 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 SUGP1Q8IWZ8 645 aaKnown RBP21.57■■□□□ 1.04
VCP-203ENST00000448530 TMEM161BQ8NDZ6 487 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 PIK3R5Q8WYR1 880 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 BICD1Q96G01 975 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 PIDD1Q9HB75 910 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 LIMD1Q9UGP4 676 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 ODF2LQ9ULJ1 636 aa21.57■■□□□ 1.04
VCP-203ENST00000448530 TMEM189-UBE2V1I3L0A0 370 aa21.56■■□□□ 1.04
VCP-203ENST00000448530 FAM13AO94988 1023 aa21.56■■□□□ 1.04
VCP-203ENST00000448530 MAPTP10636 758 aaKnown RBP21.56■■□□□ 1.04
VCP-203ENST00000448530 PROZP22891 400 aa21.56■■□□□ 1.04
VCP-203ENST00000448530 CLCNKBP51801 687 aa21.56■■□□□ 1.04
VCP-203ENST00000448530 CACNB1Q02641 598 aaPredicted RBP21.56■■□□□ 1.04
VCP-203ENST00000448530 NOLC1Q14978 699 aaKnown RBP eCLIP21.56■■□□□ 1.04
VCP-203ENST00000448530 ZPBP2Q6X784 338 aa21.56■■□□□ 1.04
VCP-203ENST00000448530 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.56■■□□□ 1.04
VCP-203ENST00000448530 UBALD2Q8IYN6 164 aa21.56■■□□□ 1.04
VCP-203ENST00000448530 SMG7Q92540 1137 aaKnown RBP21.56■■□□□ 1.04
VCP-203ENST00000448530 STAMQ92783 540 aa21.56■■□□□ 1.04
VCP-203ENST00000448530 DDX27Q96GQ7 796 aaKnown RBP21.56■■□□□ 1.04
VCP-203ENST00000448530 ZDHHC7Q9NXF8 308 aa21.56■■□□□ 1.04
VCP-203ENST00000448530 CLDN3O15551 220 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 RFPL2O75678 378 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 BRD1O95696 1058 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 PLCG1P19174 1290 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 KARSQ15046 597 aaKnown RBP21.55■■□□□ 1.04
VCP-203ENST00000448530 ARSHQ5FYA8 562 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 FEZF2Q8TBJ5 459 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 INTS4Q96HW7 963 aaKnown RBP21.55■■□□□ 1.04
VCP-203ENST00000448530 SNX27Q96L92 541 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 REEP2Q9BRK0 252 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 RHOBTB2Q9BYZ6 727 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 KCNH6Q9H252 994 aa21.55■■□□□ 1.04
VCP-203ENST00000448530 SYT1P21579 422 aa21.54■■□□□ 1.04
VCP-203ENST00000448530 SCP2P22307 547 aa21.54■■□□□ 1.04
VCP-203ENST00000448530 GRIN1Q05586 938 aa21.54■■□□□ 1.04
VCP-203ENST00000448530 UPP1Q16831 310 aa21.54■■□□□ 1.04
VCP-203ENST00000448530 XKR4Q5GH76 650 aa21.54■■□□□ 1.04
VCP-203ENST00000448530 LIN9Q5TKA1 542 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms