RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 FOSP01100 380 aaPredicted RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 COL11A1P12107 1806 aaPredicted RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 PECAM1P16284 738 aaPredicted RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 CASP1P29466 404 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ECHS1P30084 290 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 SLC18A1P54219 525 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 PTENP60484 403 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ERVK-9P63128 1117 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 KLHL30Q0D2K2 578 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 BNIP1Q12981 228 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 STK4Q13043 487 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 KCTD2Q14681 263 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 NAA25Q14CX7 972 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 NONOQ15233 471 aaKnown RBP eCLIP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ZRSR2Q15696 482 aaKnown RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ASIC2Q16515 512 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 KRT71Q3SY84 523 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 CDCA2Q69YH5 1023 aaPredicted RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 TRAF7Q6Q0C0 670 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 DLK2Q6UY11 383 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 LRRC55Q6ZSA7 311 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 TRMT10CQ7L0Y3 403 aaKnown RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 FRMD5Q7Z6J6 570 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 RIOX2Q8IUF8 465 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 MFN1Q8IWA4 741 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ADGRF4Q8IZF3 695 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 MYOCDQ8IZQ8 938 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 LRRC57Q8N9N7 239 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 NEK9Q8TD19 979 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ZNF483Q8TF39 744 aaPredicted RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 TBC1D31Q96DN5 1066 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 DTNBP1Q96EV8 351 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 SCLT1Q96NL6 688 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 SPATC1LQ9H0A9 340 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 NT5C3AQ9H0P0 336 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ACAD9Q9H845 621 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ARHGEF3Q9NR81 526 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 BARHL2Q9NY43 387 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 CCPG1Q9ULG6 757 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 NOVA2Q9UNW9 492 aaKnown RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.16□□□□□ -1.1
TRIM4-204ENST00000447480 ACTL7BQ9Y614 415 aa8.16□□□□□ -1.1
TRIM4-204ENST00000447480 MGAMO43451 1857 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 FRMPD2Q68DX3 1309 aaPredicted RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 SMIM22K7EJ46 135 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 KRIT1O00522 736 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 FKTNO75072 461 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 SMNDC1O75940 238 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 NPTXRO95502 500 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 EYA4O95677 639 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 GSTA2P09210 222 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 H2AFZP0C0S5 128 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 FCER1AP12319 257 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 SCP2P22307 547 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 RFX1P22670 979 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 CHRNA3P32297 505 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 GUCY2FP51841 1108 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 MAGOHP61326 146 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 JAG1P78504 1218 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 POU5F1Q01860 360 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 SP3Q02447 781 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 CAV1Q03135 178 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 DHX9Q08211 1270 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 NR1H3Q13133 447 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 PLS1Q14651 629 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 UAP1Q16222 522 aaPredicted RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 PKN2Q16513 984 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 HYIQ5T013 277 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 TREML2Q5T2D2 321 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 DENND2CQ68D51 928 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 RNF43Q68DV7 783 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 DUPD1Q68J44 220 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 SNRNP48Q6IEG0 339 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 GPAT2Q6NUI2 795 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 SYDE1Q6ZW31 735 aaPredicted RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 H2AFVQ71UI9 128 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 BZW1Q7L1Q6 419 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 CYFIP1Q7L576 1253 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 CLEC10AQ8IUN9 316 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 TRIM59Q8IWR1 403 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 LMNTD2Q8IXW0 634 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 AGGF1Q8N302 714 aaeCLIP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 ARHGAP18Q8N392 663 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 ZNF511Q8NB15 262 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 LRRN4Q8WUT4 740 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 NSMCE1Q8WV22 266 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 STAMQ92783 540 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 MAGOHBQ96A72 148 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 SHISA4Q96DD7 197 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 HES6Q96HZ4 224 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 SERPINB12Q96P63 405 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 FMO2Q99518 471 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 ERP44Q9BS26 406 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 PPCSQ9HAB8 311 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 RXFP1Q9HBX9 757 aa8.15□□□□□ -1.1
TRIM4-204ENST00000447480 INTS9Q9NV88 658 aaKnown RBP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRIM4-204ENST00000447480 CTTNBP2NLQ9P2B4 639 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms