RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 CLDN3O15551 220 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 TNFSF9P41273 254 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 RNASE9P60153 205 aaKnown RBP18.79■□□□□ 0.6
SMC6-206ENST00000446852 RHPN2Q8IUC4 686 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 SYCE1Q8N0S2 351 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 DDX1Q92499 740 aaKnown RBP18.79■□□□□ 0.6
SMC6-206ENST00000446852 ZNF668Q96K58 619 aaPredicted RBP18.79■□□□□ 0.6
SMC6-206ENST00000446852 HINFPQ9BQA5 517 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 MRPL4Q9BYD3 311 aaKnown RBP18.79■□□□□ 0.6
SMC6-206ENST00000446852 KATNBL1Q9H079 304 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 ST7Q9NRC1 585 aa18.79■□□□□ 0.6
SMC6-206ENST00000446852 RTN2O75298 545 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 TOM1L1O75674 476 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 CALCAP01258 141 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 PRKCBP05771 671 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 MYBL2P10244 700 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 PIK3CAP42336 1068 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 GCLCP48506 637 aaPredicted RBP18.78■□□□□ 0.6
SMC6-206ENST00000446852 FKBP1BP68106 108 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 BIRC3Q13489 604 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 SPOPLQ6IQ16 392 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 ZBTB33Q86T24 672 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 EXOC8Q8IYI6 725 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 OR5B17Q8NGF7 314 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 CGRRF1Q99675 332 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 ACO2Q99798 780 aaKnown RBP18.78■□□□□ 0.6
SMC6-206ENST00000446852 ABLIM1O14639 778 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 HBP1O60381 514 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 PDE6CP51160 858 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 CLCN3P51790 818 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 CDR2Q01850 454 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 ABRAQ8N0Z2 381 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 METTL13Q8N6R0 699 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 HES6Q96HZ4 224 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 PTPN18Q99952 460 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 VTA1Q9NP79 307 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 ERAP1Q9NZ08 941 aa18.78■□□□□ 0.6
SMC6-206ENST00000446852 LGALS2P05162 132 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 GZMAP12544 262 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 KRT5P13647 590 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 SPRYD7Q5W111 196 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 SCARA3Q6AZY7 606 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 ENOSF1Q7L5Y1 443 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 ZBTB8OSQ8IWT0 167 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 USP38Q8NB14 1042 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.77■□□□□ 0.6
SMC6-206ENST00000446852 IVNS1ABPQ9Y6Y0 642 aa18.77■□□□□ 0.6
SMC6-206ENST00000446852 STRNO43815 780 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 MCM3P25205 808 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 SLC7A5Q01650 507 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 LAMC2Q13753 1193 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 MAPK6Q16659 721 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 EFCAB12Q6NXP0 572 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 GPR142Q7Z601 462 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 GSPT2Q8IYD1 628 aaKnown RBP18.77■□□□□ 0.59
SMC6-206ENST00000446852 PBKQ96KB5 322 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 NLRP4Q96MN2 994 aa18.77■□□□□ 0.59
SMC6-206ENST00000446852 CHORDC1Q9UHD1 332 aaPredicted RBP18.77■□□□□ 0.59
SMC6-206ENST00000446852 DOCK3Q8IZD9 2030 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 RBM47A0AV96 593 aaKnown RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 CELF2O95319 508 aaKnown RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 C22orf31O95567 290 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 SNAI1O95863 264 aaPredicted RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 WDR44Q5JSH3 913 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 CCDC70Q6NSX1 233 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 BRSK2Q8IWQ3 736 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 RHOT2Q8IXI1 618 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 JPH2Q9BR39 696 aaPredicted RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 TCHPQ9BT92 498 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 UBXN6Q9BZV1 441 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 APOBEC3GQ9HC16 384 aaKnown RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 ATMINO43313 823 aaPredicted RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 GH1P01241 217 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 HADHBP55084 474 aaKnown RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 IGBP1P78318 339 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 GPC5P78333 572 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 C8orf74Q6P047 294 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 HDXQ7Z353 690 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 ZNF467Q7Z7K2 595 aaPredicted RBP18.76■□□□□ 0.59
SMC6-206ENST00000446852 AFG1LQ8WV93 481 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 C2orf40Q9H1Z8 148 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 TMEM59LQ9UK28 342 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 AMFRQ9UKV5 643 aa18.76■□□□□ 0.59
SMC6-206ENST00000446852 B4GALT5O43286 388 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 CEP104O60308 925 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 ZNF286BP0CG31 522 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 INSRRP14616 1297 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 MCL1Q07820 350 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 TCEAL1Q15170 157 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 CCNI2Q6ZMN8 369 aaPredicted RBP18.75■□□□□ 0.59
SMC6-206ENST00000446852 PPTC7Q8NI37 304 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 ACTRT1Q8TDG2 376 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 MINDY3Q9H8M7 445 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 RRAGCQ9HB90 399 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 CTTNBP2NLQ9P2B4 639 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 GRB14Q14449 540 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 CASP8Q14790 479 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 C2orf69Q8N8R5 385 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms