RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 C1orf112Q9NSG2 853 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 SAMSN1Q9NSI8 373 aaKnown RBP11.15□□□□□ -0.62
LIN54-203ENST00000446851 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 SNX9Q9Y5X1 595 aa11.15□□□□□ -0.62
LIN54-203ENST00000446851 HOXA2O43364 376 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 KLRC4O43908 158 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 LDHAP00338 332 aaKnown RBP11.14□□□□□ -0.63
LIN54-203ENST00000446851 ITGB3P05106 788 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 CCNE1P24864 410 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 PIK3CAP42336 1068 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 PMS1P54277 932 aaKnown RBP11.14□□□□□ -0.63
LIN54-203ENST00000446851 TIFAQ96CG3 184 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 ANP32EQ9BTT0 268 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 AAASQ9NRG9 546 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 EFCAB14O75071 495 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 CAND2O75155 1236 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 PFKMP08237 780 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 RFC2P35250 354 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 GTF2BQ00403 316 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 RAPGEF1Q13905 1077 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 FILIP1LQ4L180 1135 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 SPRED2Q7Z698 418 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 ZNF280BQ86YH2 543 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 GUF1Q8N442 669 aaKnown RBP11.14□□□□□ -0.63
LIN54-203ENST00000446851 PI4K2AQ9BTU6 479 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 TMEM161AQ9NX61 479 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 DNAJB4Q9UDY4 337 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 SLC26A4O43511 780 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 GJB5O95377 273 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 AXLP30530 894 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 NCKAP1LP55160 1127 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 WDR44Q5JSH3 913 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 FAM171A1Q5VUB5 890 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 PLPP4Q5VZY2 271 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 JADE1Q6IE81 842 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 TAS1R3Q7RTX0 852 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 NPAS4Q8IUM7 802 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 CACTINQ8WUQ7 758 aaKnown RBP11.14□□□□□ -0.63
LIN54-203ENST00000446851 RAD9AQ99638 391 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 C17orf80Q9BSJ5 609 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 GTPBP4Q9BZE4 634 aaKnown RBP11.14□□□□□ -0.63
LIN54-203ENST00000446851 TMEM134Q9H6X4 195 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 CHST12Q9NRB3 414 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 THSD7BQ9C0I4 1608 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 NFICP08651 508 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 POLR2BP30876 1174 aaKnown RBP11.14□□□□□ -0.63
LIN54-203ENST00000446851 SARSP49591 514 aaKnown RBP11.14□□□□□ -0.63
LIN54-203ENST00000446851 ARHGAP44Q17R89 818 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 TCTN1Q2MV58 587 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 C1orf53Q5VUE5 145 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 ZPBP2Q6X784 338 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 PPM1KQ8N3J5 372 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 CEP89Q96ST8 783 aa11.14□□□□□ -0.63
LIN54-203ENST00000446851 CNTNAP2Q9UHC6 1331 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 CD19P15391 556 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 LLGL2Q6P1M3 1020 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
LIN54-203ENST00000446851 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 TBC1D13Q9NVG8 400 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 PLAGL2Q9UPG8 496 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 OFD1O75665 1012 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 ABL1P00519 1130 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 MCF2P10911 925 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 KRT5P13647 590 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 BRCC3P46736 316 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 FKBP15Q5T1M5 1219 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 AGMOQ6ZNB7 445 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 UBE2Q1Q7Z7E8 422 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 PALB2Q86YC2 1186 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 ZNF710Q8N1W2 664 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 CNOT6LQ96LI5 555 aaKnown RBP11.13□□□□□ -0.63
LIN54-203ENST00000446851 RNF216Q9NWF9 866 aaPredicted RBP11.13□□□□□ -0.63
LIN54-203ENST00000446851 PER2O15055 1255 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 PTMAP06454 111 aaKnown RBP11.13□□□□□ -0.63
LIN54-203ENST00000446851 ZNF131P52739 623 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 TNNC1P63316 161 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 MYL5Q02045 173 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 KCNB1Q14721 858 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 DUOXA2Q1HG44 320 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 ZNF697Q5TEC3 545 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 OR6B3Q8NGW1 331 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 DHTKD1Q96HY7 919 aaPredicted RBP11.13□□□□□ -0.63
LIN54-203ENST00000446851 TUBGCP4Q9UGJ1 667 aa11.13□□□□□ -0.63
LIN54-203ENST00000446851 SMIM28A0A1B0GU29 152 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 SMTNL1A8MU46 457 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 C9IYK1 514 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 F8W810 466 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 CPB1P15086 417 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 ABCD1P33897 745 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 MGAT3Q09327 533 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 ORC1Q13415 861 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 CLUL1Q15846 466 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 PRPF38BQ5VTL8 546 aaKnown RBP11.12□□□□□ -0.63
LIN54-203ENST00000446851 GDPD5Q8WTR4 605 aa11.12□□□□□ -0.63
LIN54-203ENST00000446851 PAAF1Q9BRP4 392 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms