RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 PRIMPOLQ96LW4 560 aa8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 ZMAT2Q96NC0 199 aaKnown RBP8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 NAP1L5Q96NT1 182 aaPredicted RBP8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 ACAP3Q96P50 834 aa8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 CRACR2AQ9BSW2 395 aa8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 CCDC94Q9BW85 323 aaPredicted RBP8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 SEZ6LQ9BYH1 1024 aa8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 RPF1Q9H9Y2 349 aaKnown RBP8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 RGS18Q9NS28 235 aa8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 DMAC2Q9NW81 257 aa8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 IFNKQ9P0W0 207 aa8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 CPSF3Q9UKF6 684 aaKnown RBP8.21□□□□□ -1.09
SF3A3P1-201ENST00000446317 ZNF233A6NK53 670 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 TBKBP1A7MCY6 615 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 SMTNL1A8MU46 457 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 C9IYK1 514 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 TEX33O43247 280 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 SERPINC1P01008 464 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 CXCL10P02778 98 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 KRT19P08727 400 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 KRT13P13646 458 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 TNNI1P19237 187 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 RPL13P26373 211 aaKnown RBP8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 GRM5P41594 1212 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 VAMP7P51809 220 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 BCAR1P56945 870 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 WDR5P61964 334 aaKnown RBP8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 PPP3CAQ08209 521 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 PPIGQ13427 754 aaKnown RBP eCLIP8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 SHHQ15465 462 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 CBWD6Q4V339 395 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 CBWD3Q5JTY5 395 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 CBWD5Q5RIA9 395 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 TMEM240Q5SV17 173 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 C1orf220Q5T0J3 134 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 SLFN12LQ6IEE8 588 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 SPRED2Q7Z698 418 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 GOLGA5Q8TBA6 731 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZNF516Q92618 1163 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 PAAF1Q9BRP4 392 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 PI4K2AQ9BTU6 479 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 MTMR12Q9C0I1 747 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 ARMCX3Q9UH62 379 aaPredicted RBP8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 KCNG1Q9UIX4 513 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 PCDHB7Q9Y5E2 793 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 STYXL1Q9Y6J8 313 aa8.2□□□□□ -1.1
SF3A3P1-201ENST00000446317 LTBP2Q14767 1821 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 LCHNA4D1U4 455 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 GOLGA6L3A6NEY3 463 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 ARL5CA6NH57 179 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 NT5C1B-RDH14C9J2C7 533 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 I3L4J1 428 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 PTGESO14684 152 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 CLTAP09496 248 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 ACTN1P12814 892 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 AXLP30530 894 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 KCNJ6P48051 423 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 COPB1P53618 953 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 YARSP54577 528 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 FANCCQ00597 558 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 PPP2R3AQ06190 1150 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 SOX4Q06945 474 aaPredicted RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 GOLGA8FQ08AF8 430 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 GOLGA8DPQ0D2H9 430 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 BFSP1Q12934 665 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 BIRC3Q13489 604 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 EDRF1Q3B7T1 1238 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 SPOUT1Q5T280 376 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 CDKAL1Q5VV42 579 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 SPOPLQ6IQ16 392 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 GJB7Q6PEY0 223 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 SCARA5Q6ZMJ2 495 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 SLC24A5Q71RS6 500 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZNF280BQ86YH2 543 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 BRSK2Q8IWQ3 736 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 USP38Q8NB14 1042 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 SNX27Q96L92 541 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 PCMTD1Q96MG8 357 aaPredicted RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 FNBP1Q96RU3 617 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 RPS6KC1Q96S38 1066 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 BPIFA3Q9BQP9 254 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 TUBGCP2Q9BSJ2 902 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZBED2Q9BTP6 218 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 UBE2OQ9C0C9 1292 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 THAP9Q9H5L6 903 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 RSAD1Q9HA92 442 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 DNAJB4Q9UDY4 337 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 MTUS1Q9ULD2 1270 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 NR2E3Q9Y5X4 410 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 A0A0U1RQF3 1178 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 IKBKBO14920 756 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 PHACTR2O75167 634 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 OFD1O75665 1012 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 CALCAP01258 141 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 AMHP03971 560 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 ITGB3P05106 788 aa8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 RPLP2P05387 115 aaKnown RBP8.19□□□□□ -1.1
SF3A3P1-201ENST00000446317 ZNF18P17022 549 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms