RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 DRAXINQ8NBI3 349 aaPredicted RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 EME2A4GXA9 379 aaPredicted RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 IMPDH2P12268 514 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 FLOT2Q14254 428 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 TMEM120AQ9BXJ8 343 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 GINM1Q9NU53 330 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 TFCP2L1Q9NZI6 479 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 POGZQ7Z3K3 1410 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 DEAF1O75398 565 aaPredicted RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 ATG9AQ7Z3C6 839 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 SETDB2Q96T68 719 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 SAR1AQ9NR31 198 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 FAM58BPP0C7Q3 252 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 ANKMY2Q8IV38 441 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 DNAAF2Q9NVR5 837 aaKnown RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 NAALADL1Q9UQQ1 740 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 ASXL2Q76L83 1435 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 POTECB2RU33 542 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 INPP5AQ14642 412 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 MRPS26Q9BYN8 205 aaKnown RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 CLIC5Q9NZA1 410 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CASP2P42575 452 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 TRIM67Q6ZTA4 783 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 POLR3CQ9BUI4 534 aaPredicted RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 PSMG1O95456 288 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CALB1P05937 261 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 RAB27AP51159 221 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 EFHC1Q5JVL4 640 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CLEC4GQ6UXB4 293 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 MIGA2Q7L4E1 593 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CKAP2Q8WWK9 683 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 TMEM237Q96Q45 408 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 SH3GL1Q99961 368 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 SALL3Q9BXA9 1300 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 ESYT2A0FGR8 921 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 USP17L3A6NCW0 530 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 USP17L4A6NCW7 530 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 LSM1O15116 133 aaKnown RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 USP17L1Q7RTZ2 530 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 ARL10Q8N8L6 244 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 SLC12A4Q9UP95 1085 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 SKIV2L2P42285 1042 aaKnown RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 DGKHQ86XP1 1220 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CCDC103Q8IW40 242 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CYP26B1Q9NR63 512 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 M0R3G1 203 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 PJA2O43164 708 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 GCP02774 474 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CTTNQ14247 550 aaKnown RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 NACC1Q96RE7 527 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 PIGSQ96S52 555 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 PRPF18Q99633 342 aaKnown RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 PAGR1Q9BTK6 254 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 OCM2P0CE71 109 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 OCMP0CE72 109 aaPredicted RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 CIITAP33076 1130 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 OVGP1Q12889 678 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CCNYL1Q8N7R7 359 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CDY2AQ9Y6F7 541 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 CDY1Q9Y6F8 540 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 A0A087X0T9 212 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 GNGT2O14610 69 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 FAM228BP0C875 321 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 TSPY1Q01534 308 aa8.31□□□□□ -1.08
SMG1-202ENST00000446231 ZNF571Q7Z3V5 609 aaPredicted RBP8.31□□□□□ -1.08
SMG1-202ENST00000446231 CYP2D6P10635 497 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 GCLMP48507 274 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 INPP1P49441 399 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 PDK3Q15120 406 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 AK5Q9Y6K8 562 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 FAM237AA0A1B0GTK4 181 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 USP17L5A8MUK1 530 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 LRRC8BQ6P9F7 803 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 POMGNT1Q8WZA1 660 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 IGSF1Q8N6C5 1336 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 UNC5CO95185 931 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 TMEM253P0C7T8 217 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 ORC2Q13416 577 aaPredicted RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 DACH2Q96NX9 599 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 SMYD2Q9NRG4 433 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 GIMAP4Q9NUV9 329 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.3□□□□□ -1.087e-7■□□□□ 9.5
SMG1-202ENST00000446231 AGAP1Q9UPQ3 857 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 RARAP10276 462 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 P4HA1P13674 534 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 GEMIN4P57678 1058 aaKnown RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 MKRN4PQ13434 485 aaPredicted RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 TMPRSS6Q8IU80 811 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 ATP8B4Q8TF62 1192 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 PLXNC1O60486 1568 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 HMOX2P30519 316 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 DYNLL2Q96FJ2 89 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 MID2Q9UJV3 735 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 LAMC3Q9Y6N6 1575 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 KPNA4O00629 521 aaPredicted RBP8.3□□□□□ -1.08
SMG1-202ENST00000446231 ABL1P00519 1130 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 POLR2MP0CAP2 368 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 GALK1P51570 392 aa8.3□□□□□ -1.08
SMG1-202ENST00000446231 PMS1P54277 932 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms