RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 XXYLT1Q8NBI6 393 aa15.2■□□□□ 0.02
ERCC3-203ENST00000445889 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-203ENST00000445889 STMN4Q9H169 189 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-203ENST00000445889 ARHGEF10LQ9HCE6 1279 aa15.2■□□□□ 0.02
ERCC3-203ENST00000445889 GSTTP1A0A1W2PQM5 241 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 SUN1O94901 812 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 CGB2Q6NT52 195 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 TATDN1Q6P1N9 297 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 MIER3Q7Z3K6 550 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 SPATA21Q7Z572 469 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 SPIRE2Q8WWL2 714 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 AGBL1Q96MI9 1066 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 ZDHHC15Q96MV8 337 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 TMEM237Q96Q45 408 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 RPS6KC1Q96S38 1066 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 NAALADL1Q9UQQ1 740 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 ZHX2Q9Y6X8 837 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 CFHP08603 1231 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 MAPK4P31152 587 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 COPS2P61201 443 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 ZFYVE27Q5T4F4 411 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 TEX2Q8IWB9 1127 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 FAM71AQ8IYT1 594 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 POMGNT1Q8WZA1 660 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 GMCL1Q96IK5 515 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 TEKT3Q9BXF9 490 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 SLCO1B3Q9NPD5 702 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.19■□□□□ 0.02
ERCC3-203ENST00000445889 LARSQ9P2J5 1176 aaKnown RBP15.19■□□□□ 0.02
ERCC3-203ENST00000445889 C15orf41Q9Y2V0 281 aa15.19■□□□□ 0.02
ERCC3-203ENST00000445889 MYH11P35749 1972 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 ATP8B3O60423 1300 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 ZSCAN5DPP0CG00 497 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 RRM1P23921 792 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 ADSSP30520 456 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 FOXN2P32314 431 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 MMP14P50281 582 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 SPP2Q13103 211 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 DGKZQ13574 1117 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 ZNF268Q14587 947 aaPredicted RBP15.18■□□□□ 0.02
ERCC3-203ENST00000445889 TMED2Q15363 201 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 ATP13A4Q4VNC1 1196 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 TNFAIP8L3Q5GJ75 292 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 FAM102BQ5T8I3 360 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 KAZNQ674X7 775 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 ANKS1BQ7Z6G8 1248 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 FAM167BQ9BTA0 163 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 ANAPC5Q9UJX4 755 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.18■□□□□ 0.02
ERCC3-203ENST00000445889 CFAP73A6NFT4 308 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 SLC26A4O43511 780 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 TTC4O95801 387 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 RALAP11233 206 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 DNAJC3Q13217 504 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 BTNL9Q6UXG8 535 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 GLIS1Q8NBF1 620 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 PSPC1Q8WXF1 523 aaKnown RBP15.18■□□□□ 0.02
ERCC3-203ENST00000445889 CCDC134Q9H6E4 229 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 EBF2Q9HAK2 575 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 KCNH7Q9NS40 1196 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 NINJ2Q9NZG7 142 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 USP21Q9UK80 565 aa15.18■□□□□ 0.02
ERCC3-203ENST00000445889 POC1B-GALNT4F8VUJ3 575 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 PI4K2BG5E9Z4 385 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 HSPA6P17066 643 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 CD58P19256 250 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 IVDP26440 423 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 CRYMQ14894 314 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 VPS72Q15906 364 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 UGCGQ16739 394 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 ANKLE1Q8NAG6 615 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 GMCL1P1Q8NEA9 526 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 RUNDC3BQ96NL0 473 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 COL20A1Q9P218 1284 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 SEL1LQ9UBV2 794 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 WNK3Q9BYP7 1800 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 ETS1P14921 441 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 PSMC4P43686 418 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 SP4Q02446 784 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 SNRNP35Q16560 246 aaKnown RBP15.17■□□□□ 0.02
ERCC3-203ENST00000445889 ACSF2Q96CM8 615 aaPredicted RBP15.17■□□□□ 0.02
ERCC3-203ENST00000445889 FAXDC2Q96IV6 333 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 STRA6Q9BX79 667 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
ERCC3-203ENST00000445889 ETNK1Q9HBU6 452 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 COL24A1Q17RW2 1714 aa15.17■□□□□ 0.02
ERCC3-203ENST00000445889 BNIP1Q12981 228 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 CYP1B1Q16678 543 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 ECHDC2Q86YB7 292 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 C4orf33Q8N1A6 199 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 HAUS1Q96CS2 278 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 ZNF570Q96NI8 536 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 SUGT1Q9Y2Z0 365 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 OAS1P00973 400 aaKnown RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 ATF2P15336 505 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 MSH2P43246 934 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 RARRES1P49788 294 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 CLUL1Q15846 466 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms