RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 IL18RAPO95256 599 aa18.9■□□□□ 0.62
SGCE-206ENST00000445866 AMHP03971 560 aa18.9■□□□□ 0.62
SGCE-206ENST00000445866 DLATP10515 647 aaKnown RBP18.9■□□□□ 0.62
SGCE-206ENST00000445866 KCNJ6P48051 423 aa18.9■□□□□ 0.62
SGCE-206ENST00000445866 VAMP7P51809 220 aa18.9■□□□□ 0.62
SGCE-206ENST00000445866 PSMD6Q15008 389 aa18.9■□□□□ 0.62
SGCE-206ENST00000445866 PARD3BQ8TEW8 1205 aa18.9■□□□□ 0.62
SGCE-206ENST00000445866 POP1Q99575 1024 aaKnown RBP18.9■□□□□ 0.62
SGCE-206ENST00000445866 TTC26A0AVF1 554 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 H0YGN5 161 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 ATP1A3P13637 1013 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 ZNF18P17022 549 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 EEF1GP26641 437 aaKnown RBP18.89■□□□□ 0.61
SGCE-206ENST00000445866 WDR5P61964 334 aaKnown RBP18.89■□□□□ 0.61
SGCE-206ENST00000445866 PPP2R3AQ06190 1150 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 SURF1Q15526 300 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 TCERG1LQ5VWI1 586 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 ALKAL1Q6UXT8 129 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 USP37Q86T82 979 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 CD302Q8IX05 232 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 ANKRD20A12PQ8NF67 263 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 TMC2Q8TDI7 906 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 GAD1Q99259 594 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 ASB7Q9H672 318 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 RSAD1Q9HA92 442 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 ARL5CA6NH57 179 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 MEFVO15553 781 aaPredicted RBP18.89■□□□□ 0.61
SGCE-206ENST00000445866 FGFR1P11362 822 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 TNNI1P19237 187 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 MARSP56192 900 aaKnown RBP18.89■□□□□ 0.61
SGCE-206ENST00000445866 SPAG1Q07617 926 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 BFSP1Q12934 665 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 GLB1LQ6UWU2 654 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 NPAS4Q8IUM7 802 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 PLEKHO2Q8TD55 490 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 HERVK_113Q902F9 699 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 TOP1MTQ969P6 601 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 ZFP42Q96MM3 310 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 CXCL16Q9H2A7 254 aa18.89■□□□□ 0.61
SGCE-206ENST00000445866 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.89■□□□□ 0.61
SGCE-206ENST00000445866 OFD1O75665 1012 aa18.88■□□□□ 0.61
SGCE-206ENST00000445866 PRKCSHP14314 528 aaPredicted RBP18.88■□□□□ 0.61
SGCE-206ENST00000445866 WNT7BP56706 349 aa18.88■□□□□ 0.61
SGCE-206ENST00000445866 DLG4P78352 724 aa18.88■□□□□ 0.61
SGCE-206ENST00000445866 DCAF17Q5H9S7 520 aaPredicted RBP18.88■□□□□ 0.61
SGCE-206ENST00000445866 TRIM59Q8IWR1 403 aa18.88■□□□□ 0.61
SGCE-206ENST00000445866 SNX27Q96L92 541 aa18.88■□□□□ 0.61
SGCE-206ENST00000445866 TUBGCP2Q9BSJ2 902 aa18.88■□□□□ 0.61
SGCE-206ENST00000445866 INPP5FQ9Y2H2 1132 aa18.88■□□□□ 0.61
SGCE-206ENST00000445866 SMIM28A0A1B0GU29 152 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 PES1O00541 588 aaKnown RBP18.87■□□□□ 0.61
SGCE-206ENST00000445866 TRIM49P0CI25 452 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 TRIM49CP0CI26 452 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 MLH1P40692 756 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 AFF1P51825 1210 aaKnown RBP18.87■□□□□ 0.61
SGCE-206ENST00000445866 DEFB103AP81534 67 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 TFAMQ00059 246 aaKnown RBP18.87■□□□□ 0.61
SGCE-206ENST00000445866 KRT31Q15323 416 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 JADE1Q6IE81 842 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 FAM117BQ6P1L5 589 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 ABI1Q8IZP0 508 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 CRIPAKQ8N1N5 446 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 HELQQ8TDG4 1101 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 KIF12Q96FN5 646 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 RPS6KC1Q96S38 1066 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 MTIF3Q9H2K0 278 aaKnown RBP18.87■□□□□ 0.61
SGCE-206ENST00000445866 MIOSQ9NXC5 875 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 CXXC1Q9P0U4 656 aaPredicted RBP18.87■□□□□ 0.61
SGCE-206ENST00000445866 SLC4A7Q9Y6M7 1214 aa18.87■□□□□ 0.61
SGCE-206ENST00000445866 LRRC10BA6NIK2 292 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 LRRIQ3A6PVS8 624 aaPredicted RBP18.86■□□□□ 0.61
SGCE-206ENST00000445866 HOXA2O43364 376 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 SERPINC1P01008 464 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 TPM2P07951 284 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 PLCB2Q00722 1185 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 DUOXA2Q1HG44 320 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 XKR4Q5GH76 650 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 CLLU1OSQ5K130 101 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 LMBRD2Q68DH5 695 aaPredicted RBP18.86■□□□□ 0.61
SGCE-206ENST00000445866 TMCO2Q7Z6W1 182 aaPredicted RBP18.86■□□□□ 0.61
SGCE-206ENST00000445866 CACTINQ8WUQ7 758 aaKnown RBP18.86■□□□□ 0.61
SGCE-206ENST00000445866 ZMAT2Q96NC0 199 aaKnown RBP18.86■□□□□ 0.61
SGCE-206ENST00000445866 VPS16Q9H269 839 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 MMRN2Q9H8L6 949 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 TAB2Q9NYJ8 693 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 CNTN3Q9P232 1028 aa18.86■□□□□ 0.61
SGCE-206ENST00000445866 LIMA1Q9UHB6 759 aaKnown RBP18.86■□□□□ 0.61
SGCE-206ENST00000445866 STX10O60499 249 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 POMCP01189 267 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 KCNE1P15382 129 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 ENPEPQ07075 957 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 TMEM132DQ14C87 1099 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 NOMO2Q5JPE7 1267 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 GLRA4Q5JXX5 417 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 C1orf220Q5T0J3 134 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 ZNF516Q92618 1163 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 UBE2OQ9C0C9 1292 aaKnown RBP18.85■□□□□ 0.61
SGCE-206ENST00000445866 THP07101 528 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 GCLMP48507 274 aa18.85■□□□□ 0.61
SGCE-206ENST00000445866 GATMP50440 423 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms