RNA–Protein interactions for RNA: ENST00000445853.5

FLOT1-206, Transcript of flotillin 1, humanhuman

TSL 1 (best)

Gene FLOT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-206ENST00000445853 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.32
FLOT1-206ENST00000445853 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 MEIS3P2A8K0S8 358 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 RFXAPO00287 272 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 FSCN2O14926 492 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 TADA2AO75478 443 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 IL18RAPO95256 599 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 SMC2O95347 1197 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 PPP1R2P41236 205 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 OR1G1P47890 313 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 SLC11A1P49279 550 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 MYBPC2Q14324 1141 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 KCNB1Q14721 858 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 SURF1Q15526 300 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 BMT2Q1RMZ1 405 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 CLEC17AQ6ZS10 378 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 CDR2LQ86X02 465 aaPredicted RBP13.02□□□□□ -0.33
FLOT1-206ENST00000445853 ZNF280BQ86YH2 543 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 PABPC5Q96DU9 382 aaKnown RBP13.02□□□□□ -0.33
FLOT1-206ENST00000445853 SNX27Q96L92 541 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
FLOT1-206ENST00000445853 GSDMAQ96QA5 445 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 PPP1R10Q96QC0 940 aaKnown RBP13.02□□□□□ -0.33
FLOT1-206ENST00000445853 TCF25Q9BQ70 676 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 OXCT2Q9BYC2 517 aaPredicted RBP13.02□□□□□ -0.33
FLOT1-206ENST00000445853 ENTPD7Q9NQZ7 604 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 MRPL17Q9NRX2 175 aaKnown RBP13.02□□□□□ -0.33
FLOT1-206ENST00000445853 TBC1D7Q9P0N9 293 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 THEGQ9P2T0 379 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 SERTAD1Q9UHV2 236 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 C2CD2Q9Y426 696 aa13.02□□□□□ -0.33
FLOT1-206ENST00000445853 SF3B1O75533 1304 aaKnown RBP eCLIP13.02□□□□□ -0.334e-7■■■■■ 133.7
FLOT1-206ENST00000445853 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 PTGESO14684 152 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 PRPF40AO75400 957 aaKnown RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 DDHD2O94830 711 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 RHOBTB3O94955 611 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 SOD2P04179 222 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 AFMP43652 599 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 UBE2HP62256 183 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 MRPS5P82675 430 aaKnown RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 SKIV2LQ15477 1246 aaKnown RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 USP41Q3LFD5 358 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 ZC2HC1CQ53FD0 456 aaPredicted RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 KIAA1841Q6NSI8 718 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 EPM2AIP1Q7L775 607 aaPredicted RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 ZBTB33Q86T24 672 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 FMR1NBQ8N0W7 255 aaPredicted RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 EFHBQ8N7U6 833 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 CACTINQ8WUQ7 758 aaKnown RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 TLE6Q9H808 572 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 CPSF3Q9UKF6 684 aaKnown RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
FLOT1-206ENST00000445853 UBQLN1Q9UMX0 589 aaKnown RBP13.01□□□□□ -0.33
FLOT1-206ENST00000445853 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13□□□□□ -0.33
FLOT1-206ENST00000445853 EXTL3O43909 919 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 FAM189A1O60320 539 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 KINO60870 393 aaKnown RBP13□□□□□ -0.33
FLOT1-206ENST00000445853 EDN1P05305 212 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 URODP06132 367 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 HOXB8P17481 243 aaPredicted RBP13□□□□□ -0.33
FLOT1-206ENST00000445853 CUL4BQ13620 913 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 CAMK1Q14012 370 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 UPP1Q16831 310 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 KNOP1Q1ED39 458 aaKnown RBP13□□□□□ -0.33
FLOT1-206ENST00000445853 CTC1Q2NKJ3 1217 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 SLC10A6Q3KNW5 377 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 ARMCX5Q6P1M9 558 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 TMEM184AQ6ZMB5 413 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 RTL10Q7L3V2 364 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 SPRED2Q7Z698 418 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 USP37Q86T82 979 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 MICALL1Q8N3F8 863 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 HERC2P3Q9BVR0 1158 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 ZBP1Q9H171 429 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 KLK14Q9P0G3 267 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 DNAJB4Q9UDY4 337 aa13□□□□□ -0.33
FLOT1-206ENST00000445853 RALGAPA2Q2PPJ7 1873 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 B3GAT3O94766 335 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 CXCL14O95715 111 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 EFEMP2O95967 443 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 RPN1P04843 607 aaKnown RBP12.99□□□□□ -0.33
FLOT1-206ENST00000445853 LRPAP1P30533 357 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 AFF1P51825 1210 aaKnown RBP12.99□□□□□ -0.33
FLOT1-206ENST00000445853 DSG1Q02413 1049 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 DPYDQ12882 1025 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 NAB2Q15742 525 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 TCEAL5Q5H9L2 206 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 CYP26C1Q6V0L0 522 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
FLOT1-206ENST00000445853 RNF168Q8IYW5 571 aaPredicted RBP12.99□□□□□ -0.33
FLOT1-206ENST00000445853 ENGASEQ8NFI3 743 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 BEST2Q8NFU1 509 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 HDAC7Q8WUI4 952 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 STAMQ92783 540 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 ZBTB45Q96K62 511 aaPredicted RBP12.99□□□□□ -0.33
FLOT1-206ENST00000445853 GBP4Q96PP9 640 aa12.99□□□□□ -0.33
FLOT1-206ENST00000445853 GDPD2Q9HCC8 539 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms