RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MCL1Q07820 350 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 DCAF4L1Q3SXM0 396 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 TCEAL5Q5H9L2 206 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 CEP120Q8N960 986 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 CCDC51Q96ER9 411 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 RGS18Q9NS28 235 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 FAM105AQ9NUU6 356 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 HSPBP1Q9NZL4 362 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 RWDD2AQ9UIY3 292 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 AGO2Q9UKV8 859 aaKnown RBP18.76■□□□□ 0.59
LIME1-202ENST00000444951 PCDHB2Q9Y5E7 798 aa18.76■□□□□ 0.59
LIME1-202ENST00000444951 C5orf42Q9H799 3197 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 KIAA1671Q9BY89 1806 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 MCF2P10911 925 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 IL9P15248 144 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 GARTP22102 1010 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 CTNNB1P35222 781 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 ACOT2P49753 483 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 TPD52L1Q16890 204 aaPredicted RBP18.75■□□□□ 0.59
LIME1-202ENST00000444951 LEXMQ3ZCV2 418 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 ZBTB41Q5SVQ8 909 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 CEP135Q66GS9 1140 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 LRSAM1Q6UWE0 723 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 FIBCD1Q8N539 461 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 RDH13Q8NBN7 331 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 LPPQ93052 612 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 FAM213AQ9BRX8 229 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 NAT10Q9H0A0 1025 aaKnown RBP18.75■□□□□ 0.59
LIME1-202ENST00000444951 TSPY26PQ9H489 355 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 NXF3Q9H4D5 531 aaKnown RBP18.75■□□□□ 0.59
LIME1-202ENST00000444951 CGNQ9P2M7 1197 aaKnown RBP18.75■□□□□ 0.59
LIME1-202ENST00000444951 TRAF3IP3Q9Y228 551 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 IPPQ9Y573 584 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 STYXL1Q9Y6J8 313 aa18.75■□□□□ 0.59
LIME1-202ENST00000444951 H3BQ06 376 aaPredicted RBP18.74■□□□□ 0.59
LIME1-202ENST00000444951 OGTO15294 1046 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 GRM6O15303 877 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 EXOC3O60645 756 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 NR2F2P24468 414 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 AKAP5P24588 427 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 LRRC63Q05C16 580 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 ADAM9Q13443 819 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 PTPROQ16827 1216 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 ZCWPW2Q504Y3 356 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 TTI2Q6NXR4 508 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 SLC24A5Q71RS6 500 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 ZNF689Q96CS4 500 aaPredicted RBP18.74■□□□□ 0.59
LIME1-202ENST00000444951 FAM212AQ96EL1 285 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 MED15Q96RN5 788 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 DUSP9Q99956 384 aaKnown RBP18.74■□□□□ 0.59
LIME1-202ENST00000444951 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 C1orf112Q9NSG2 853 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 SNTG2Q9NY99 539 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 PARP2Q9UGN5 583 aa18.74■□□□□ 0.59
LIME1-202ENST00000444951 C9IYK1 514 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 STAG3L1P0CL83 205 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 ITGA4P13612 1032 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 RPL13P26373 211 aaKnown RBP18.73■□□□□ 0.59
LIME1-202ENST00000444951 ERCC5P28715 1186 aaPredicted RBP18.73■□□□□ 0.59
LIME1-202ENST00000444951 TNFSF9P41273 254 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 RAB27AP51159 221 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 SNRPFP62306 86 aaKnown RBP18.73■□□□□ 0.59
LIME1-202ENST00000444951 TIGD5Q53EQ6 642 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 ECHDC2Q86YB7 292 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 CRIPAKQ8N1N5 446 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 GPD1LQ8N335 351 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 CSGALNACT2Q8N6G5 542 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 AOPEPQ8N6M6 819 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 XXYLT1Q8NBI6 393 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 SMG8Q8ND04 991 aaKnown RBP18.73■□□□□ 0.59
LIME1-202ENST00000444951 CCDC94Q9BW85 323 aaPredicted RBP18.73■□□□□ 0.59
LIME1-202ENST00000444951 C11orf16Q9NQ32 467 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 LRFN2Q9ULH4 789 aa18.73■□□□□ 0.59
LIME1-202ENST00000444951 A0A0U1RQF3 1178 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 MEIS3P2A8K0S8 358 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 C5orf67F2Z3F1 127 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 CETN3O15182 167 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 CSPG5O95196 566 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 SKIP12755 728 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 BMPR1AP36894 532 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 CASP4P49662 377 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 ZNF165P49910 485 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 GATMP50440 423 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 ZNF445P59923 1031 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 COL19A1Q14993 1142 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 EDRF1Q3B7T1 1238 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 HSP90AA4PQ58FG1 418 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 PTCRAQ6ISU1 281 aaPredicted RBP18.72■□□□□ 0.59
LIME1-202ENST00000444951 CBWD2Q8IUF1 395 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 CREBRFQ8IUR6 639 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 HACE1Q8IYU2 909 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 CLP1Q92989 425 aaKnown RBP18.72■□□□□ 0.59
LIME1-202ENST00000444951 C1QTNF1Q9BXJ1 281 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 SRRTQ9BXP5 876 aaKnown RBP18.72■□□□□ 0.59
LIME1-202ENST00000444951 RNF19AQ9NV58 838 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 KLK14Q9P0G3 267 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 PCDHB7Q9Y5E2 793 aa18.72■□□□□ 0.59
LIME1-202ENST00000444951 FAM86C2PA6NEL3 165 aa18.71■□□□□ 0.59
LIME1-202ENST00000444951 EXTL3O43909 919 aa18.71■□□□□ 0.59
LIME1-202ENST00000444951 DGKIO75912 1065 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms