RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 VN1R2Q8NFZ6 395 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 ACO2Q99798 780 aaKnown RBP12.15□□□□□ -0.46
HLA-F-221ENST00000444621 PARVGQ9HBI0 331 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 FBXO2Q9UK22 296 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-221ENST00000444621 GDAQ9Y2T3 454 aa12.15□□□□□ -0.46
HLA-F-221ENST00000444621 PRG3Q9Y2Y8 225 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-221ENST00000444621 MORC2Q9Y6X9 1032 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-221ENST00000444621 C2orf71A6NGG8 1288 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 SPTLC2O15270 562 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 CLDN3O15551 220 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 PPP6R2O75170 966 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 MCF2P10911 925 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 HOXB8P17481 243 aaPredicted RBP12.14□□□□□ -0.47
HLA-F-221ENST00000444621 SP100P23497 879 aaPredicted RBP12.14□□□□□ -0.47
HLA-F-221ENST00000444621 STAT6P42226 847 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 AMPD3Q01432 767 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 CREMQ03060 361 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 TUSC3Q13454 348 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 KYAT1Q16773 422 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 SPECC1Q5M775 1068 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 NT5DC1Q5TFE4 455 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 FOXD4L5Q5VV16 416 aaPredicted RBP12.14□□□□□ -0.47
HLA-F-221ENST00000444621 CES5AQ6NT32 575 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 LLGL2Q6P1M3 1020 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 FAM173BQ6P4H8 233 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 MPZL3Q6UWV2 235 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 HAUS6Q7Z4H7 955 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 ADSSL1Q8N142 457 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 KREMEN2Q8NCW0 462 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 FOXD4L4Q8WXT5 416 aaPredicted RBP12.14□□□□□ -0.47
HLA-F-221ENST00000444621 NKD2Q969F2 451 aaPredicted RBP12.14□□□□□ -0.47
HLA-F-221ENST00000444621 EPSTI1Q96J88 318 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 ZFP42Q96MM3 310 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 ACAP3Q96P50 834 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 USP28Q96RU2 1077 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 ZBP1Q9H171 429 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 SLC38A7Q9NVC3 462 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 ARHGAP28Q9P2N2 729 aa12.14□□□□□ -0.47
HLA-F-221ENST00000444621 NPHP3-ACAD11A0A0J9YXS1 232 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 HIDE1A8MVS5 230 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 K7ENM7 598 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 TRAK2O60296 914 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 TOM1L1O75674 476 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 RECQL4O94761 1208 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 YEATS4O95619 227 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 F13A1P00488 732 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 SOD2P04179 222 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 KLRC2P26717 231 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 NASPP49321 788 aaPredicted RBP12.13□□□□□ -0.47
HLA-F-221ENST00000444621 LIG4P49917 911 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 ELAVL2Q12926 359 aaKnown RBP12.13□□□□□ -0.47
HLA-F-221ENST00000444621 USP41Q3LFD5 358 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 ZPBP2Q6X784 338 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 TMEM184AQ6ZMB5 413 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 DAW1Q8N136 415 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 KCNG4Q8TDN1 519 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 UROC1Q96N76 676 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 CLIC6Q96NY7 704 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 REEP2Q9BRK0 252 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 TARS2Q9BW92 718 aaKnown RBP12.13□□□□□ -0.47
HLA-F-221ENST00000444621 S1PR5Q9H228 398 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 BLOC1S4Q9NUP1 217 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 DZANK1Q9NVP4 752 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 MIOSQ9NXC5 875 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 FAM13BQ9NYF5 915 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 TFIP11Q9UBB9 837 aaKnown RBP12.13□□□□□ -0.47
HLA-F-221ENST00000444621 ATP6V1DQ9Y5K8 247 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.13□□□□□ -0.47
HLA-F-221ENST00000444621 IRAK3Q9Y616 596 aa12.13□□□□□ -0.47
HLA-F-221ENST00000444621 DMXL1Q9Y485 3027 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 TRAPPC3O43617 180 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 CUTAO60888 179 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 MAPTP10636 758 aaKnown RBP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 HARSP12081 509 aaKnown RBP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 GAP43P17677 238 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 GRM5P41594 1212 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 GLUD2P49448 558 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 AFF1P51825 1210 aaKnown RBP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 NCKAP1LP55160 1127 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 OSTNP61366 133 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 GRIN1Q05586 938 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 DSC1Q08554 894 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 MAPK7Q13164 816 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 HSP90AA2PQ14568 343 aaPredicted RBP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 NOLC1Q14978 699 aaKnown RBP eCLIP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 ARSHQ5FYA8 562 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 EEF1DP3Q658K8 133 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 ANKRD54Q6NXT1 300 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 PDXDC1Q6P996 788 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 LINC00301Q8NCQ3 95 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 TMEM161BQ8NDZ6 487 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 DDX27Q96GQ7 796 aaKnown RBP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 PYM1Q9BRP8 204 aaKnown RBP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 HERC2P3Q9BVR0 1158 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 APOL5Q9BWW9 433 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 PANK2Q9BZ23 570 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 SMOC2Q9H3U7 446 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 CUEDC2Q9H467 287 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms