RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 ST6GALNAC4Q9H4F1 302 aa13.32□□□□□ -0.28
SLC48A1-202ENST00000442892 NSUN3Q9H649 340 aaKnown RBP13.32□□□□□ -0.28
SLC48A1-202ENST00000442892 PRDM6Q9NQX0 595 aa13.32□□□□□ -0.28
SLC48A1-202ENST00000442892 LMCD1Q9NZU5 365 aa13.32□□□□□ -0.28
SLC48A1-202ENST00000442892 COL6A3P12111 3177 aa13.32□□□□□ -0.28
SLC48A1-202ENST00000442892 F8W810 466 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 OGTO15294 1046 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 GADD45BO75293 160 aaPredicted RBP13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 PIGRP01833 764 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 RPN1P04843 607 aaKnown RBP13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 ACOT2P49753 483 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 UBE3AQ05086 875 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 PPP2R3AQ06190 1150 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 KMT5BQ4FZB7 885 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 SLFN12LQ6IEE8 588 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 GSTCDQ8NEC7 633 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 AUTS2Q8WXX7 1259 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 PPP2R3CQ969Q6 453 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 SAAL1Q96ER3 474 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 IGSF21Q96ID5 467 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 COLEC11Q9BWP8 271 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 PCIF1Q9H4Z3 704 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 TMEM206Q9H813 350 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 RPF1Q9H9Y2 349 aaKnown RBP13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 GOLGA2P5Q9HBQ8 144 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 AGO2Q9UKV8 859 aaKnown RBP13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 BRWD1Q9NSI6 2320 aa13.31□□□□□ -0.28
SLC48A1-202ENST00000442892 FAM237AA0A1B0GTK4 181 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 PVALEFA0A1B0GWK0 134 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 GOLGA8IPA6NC78 632 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 GOLGA8JA6NMD2 632 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 C2CD2LO14523 706 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 INPPL1O15357 1258 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 TADA2AO75478 443 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 PPP1R37O75864 691 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 CLTAP09496 248 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 ERVFC1P60507 584 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 PLCB3Q01970 1234 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 FAM160A1Q05DH4 1040 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 TUSC3Q13454 348 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 PNOCQ13519 176 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 ARMCX5Q6P1M9 558 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 CNNM4Q6P4Q7 775 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 ADGRD2Q7Z7M1 963 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 VPS52Q8N1B4 723 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 PAAF1Q9BRP4 392 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 FAM213AQ9BRX8 229 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 ZMYM2Q9UBW7 1377 aa13.3□□□□□ -0.28
SLC48A1-202ENST00000442892 A0A0B4J269 797 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 SMIM28A0A1B0GU29 152 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 CARNS1A5YM72 827 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 PER2O15055 1255 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 KLRC4O43908 158 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 KINO60870 393 aaKnown RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 PRPF40AO75400 957 aaKnown RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 POU3F3P20264 500 aaPredicted RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 GTF2F1P35269 517 aaKnown RBP eCLIP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 NRIP1P48552 1158 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 DSC1Q08554 894 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 CAMK1Q14012 370 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 HSP90AA2PQ14568 343 aaPredicted RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 POSTNQ15063 836 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 KYAT1Q16773 422 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 SLC10A6Q3KNW5 377 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 KANK3Q6NY19 840 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 FMR1NBQ8N0W7 255 aaPredicted RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 ERCC4Q92889 916 aaPredicted RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 C18orf25Q96B23 403 aaPredicted RBP13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 CBWD1Q9BRT8 395 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 STRA6Q9BX79 667 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 MARCH5Q9NX47 278 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 CLDND1Q9NY35 253 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 LZTS1Q9Y250 596 aa13.29□□□□□ -0.28
SLC48A1-202ENST00000442892 HIDE1A8MVS5 230 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 LACTBL1A8MY62 500 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 CLIC2O15247 247 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 EIF3DO15371 548 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 KIF4AO95239 1232 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 CXCL14O95715 111 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 MYL1P05976 194 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 URODP06132 367 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 CYP2J2P51589 502 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 DPYDQ12882 1025 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 ENOX2Q16206 610 aaKnown RBP13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 KIAA1841Q6NSI8 718 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 LLGL2Q6P1M3 1020 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 HS2ST1Q7LGA3 356 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 DDX53Q86TM3 631 aaKnown RBP13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 CEP57Q86XR8 500 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 ZSWIM2Q8NEG5 633 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 KCNN1Q92952 543 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 B3GALT6Q96L58 329 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 ZMAT2Q96NC0 199 aaKnown RBP13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 TLE6Q9H808 572 aa13.28□□□□□ -0.28
SLC48A1-202ENST00000442892 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms