RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 EDC4Q6P2E9 1401 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 PPIP5K1Q6PFW1 1433 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 MYO5BQ9ULV0 1848 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 A0A0A6YYJ9 748 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 TOX4O94842 621 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 GNAT2P19087 354 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 POU3F2P20265 443 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 PTGS2P35354 604 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 GPR15P49685 360 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 SCNN1BP51168 640 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 KPNA1P52294 538 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 CALD1Q05682 793 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 EXOSC9Q06265 439 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 ELAVL1Q15717 326 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 C21orf62-AS1Q17RA5 79 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 FKBP15Q5T1M5 1219 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 ZKSCAN2Q63HK3 967 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 GAREM2Q75VX8 874 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 NIM1KQ8IY84 436 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 CDYL2Q8N8U2 506 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 OR2W6PQ8NHA6 318 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 NKD2Q969F2 451 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 PAWRQ96IZ0 340 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 COG3Q96JB2 828 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 RPL10LQ96L21 214 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 ELF4Q99607 663 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 NOL10Q9BSC4 688 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 MTG2Q9H4K7 406 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 OXSMQ9NWU1 459 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 KCNG1Q9UIX4 513 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 G3BP2Q9UN86 482 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 THRAP3Q9Y2W1 955 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 REXO2Q9Y3B8 237 aaKnown RBP4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 AATKQ6ZMQ8 1374 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 PLEKHG1Q9ULL1 1385 aa4.24□□□□□ -1.73
HMGB3P11-201ENST00000440127 GSG1L2A8MUP6 293 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 OPHN1O60890 802 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 PRPF6O94906 941 aaKnown RBP4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 F2P00734 622 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 IGHDP01880 384 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 SLPIP03973 132 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 SLC9A1P19634 815 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 PRKAR2BP31323 418 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 INHBCP55103 352 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 HSP90AB2PQ58FF8 381 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 DCAF17Q5H9S7 520 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 ODR4Q5SWX8 454 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 GJC2Q5T442 439 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 KANSL1Q7Z3B3 1105 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 RNF180Q86T96 592 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 LRRTM3Q86VH5 581 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 DHX37Q8IY37 1157 aaKnown RBP4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 UNC5BQ8IZJ1 945 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 CMTM4Q8IZR5 234 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 BCL6BQ8N143 479 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 SYNE4Q8N205 404 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 IL17DQ8TAD2 202 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 JDP2Q8WYK2 163 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 PRRX2Q99811 253 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 RWDD1Q9H446 243 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 HOMER2Q9NSB8 354 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 DNAI1Q9UI46 699 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 CLCA2Q9UQC9 943 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 ATP8A1Q9Y2Q0 1164 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 PCDHB6Q9Y5E3 794 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 KIF13AQ9H1H9 1805 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 ADGRB2O60241 1585 aa4.23□□□□□ -1.73
HMGB3P11-201ENST00000440127 ADAMTS13Q76LX8 1427 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 NRXN3Q9Y4C0 1643 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 SETD1AO15047 1707 aaKnown RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 UBE2QL1A1L167 161 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 DVL2O14641 736 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 IPO8O15397 1037 aaKnown RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 PDE8AO60658 829 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 KPNA6O60684 536 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 RECQL4O94761 1208 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 HMOX1P09601 288 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 MYCLP1P12525 358 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 SDSP20132 328 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 PTX3P26022 381 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 LSP1P33241 339 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 KIR2DL3P43628 341 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 WNT3AP56704 352 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 EVA1CP58658 441 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 GNAI1P63096 354 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 DPTQ07507 201 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 LMOD3Q0VAK6 560 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 SPIDRQ14159 915 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 RRP1BQ14684 758 aaKnown RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 MVPQ14764 893 aaKnown RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 MYBPC3Q14896 1274 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 ALDH1L2Q3SY69 923 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 BRDTQ58F21 947 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 APBB1IPQ7Z5R6 666 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 SKAP1Q86WV1 359 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 GLB1L2Q8IW92 636 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 CHAC2Q8WUX2 184 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 SSH1Q8WYL5 1049 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 TSR2Q969E8 191 aaKnown RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 PHACTR3Q96KR7 559 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms