RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 LAMC2Q13753 1193 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 C10orf62Q5T681 223 aaPredicted RBP12.25□□□□□ -0.45
CCBE1-202ENST00000439986 C11orf96Q7Z7L8 435 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 PCGF5Q86SE9 256 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 RHOT2Q8IXI1 618 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
CCBE1-202ENST00000439986 KANSL2Q9H9L4 492 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 ARHGEF37A1IGU5 675 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 RHOBTB3O94955 611 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 LSP1P33241 339 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 SYDE2Q5VT97 1194 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 SUN5Q8TC36 379 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 ZBED2Q9BTP6 218 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 OSBPL10Q9BXB5 764 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 EPS15L1Q9UBC2 864 aa12.25□□□□□ -0.45
CCBE1-202ENST00000439986 ZMYND8Q9ULU4 1186 aaPredicted RBP12.25□□□□□ -0.45
CCBE1-202ENST00000439986 PODXLO00592 558 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 ATP5HO75947 161 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 EIF2AK2P19525 551 aaKnown RBP12.24□□□□□ -0.45
CCBE1-202ENST00000439986 PMS2P54278 862 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 MYO1EQ12965 1108 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 ZNF211Q13398 564 aaPredicted RBP12.24□□□□□ -0.45
CCBE1-202ENST00000439986 PRR23CQ6ZRP0 262 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
CCBE1-202ENST00000439986 SLC44A5Q8NCS7 719 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 RNF139Q8WU17 664 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 NCLNQ969V3 563 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 ZIM3Q96PE6 472 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 CCSER1Q9C0I3 900 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 RANBP17Q9H2T7 1088 aaKnown RBP12.24□□□□□ -0.45
CCBE1-202ENST00000439986 SARS2Q9NP81 518 aaKnown RBP12.24□□□□□ -0.45
CCBE1-202ENST00000439986 DNAJC12Q9UKB3 198 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 ATP11BQ9Y2G3 1177 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 CD163L1Q9NR16 1453 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 MT-ND3P03897 115 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 MLH1P40692 756 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 CACNB3P54284 484 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 OR6B3Q8NGW1 331 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 AGXT2Q9BYV1 514 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 TMEM260Q9NX78 707 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 TIMM44O43615 452 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 SULT1B1O43704 296 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 KLK7P49862 253 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 SEC24CP53992 1094 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 GRM4Q14833 912 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 FRA10AC1Q70Z53 315 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 TRAPPC11Q7Z392 1133 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 GCNAQ96QF7 691 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 XDHP47989 1333 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 EXOC1LA0A1B0GW35 172 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 CARSP49589 748 aaKnown RBP12.24□□□□□ -0.45
CCBE1-202ENST00000439986 BBS9Q3SYG4 887 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 ILDR1Q86SU0 546 aaPredicted RBP12.24□□□□□ -0.45
CCBE1-202ENST00000439986 RAD21L1Q9H4I0 556 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 PARVGQ9HBI0 331 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 MLXIPLQ9NP71 852 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 SERPINB13Q9UIV8 391 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 LEMD3Q9Y2U8 911 aa12.24□□□□□ -0.45
CCBE1-202ENST00000439986 MMGT1Q8N4V1 131 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 FAM117AQ9C073 453 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 SMARCAD1Q9H4L7 1026 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 PARVAQ9NVD7 372 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 RRN3Q9NYV6 651 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 PNMA6FA0A0J9YX94 578 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 MRPS15P82914 257 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 AOC3Q16853 763 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 ZCCHC8Q6NZY4 707 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 SFR1Q86XK3 245 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 S100PBPQ96BU1 408 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 PITPNM3Q9BZ71 974 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 TMEM51Q9NW97 253 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 KIF17Q9P2E2 1029 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 AFF4Q9UHB7 1163 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 PCDHA6Q9UN73 950 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 PCDHA8Q9Y5H6 950 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 FRMPD1Q5SYB0 1578 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 SYNGAP1Q96PV0 1343 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 USP32Q8NFA0 1604 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 POTECB2RU33 542 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 NT5C2P49902 561 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 CAPRIN1Q14444 709 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 GIMAP8Q8ND71 665 aaPredicted RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 SH3RF3Q8TEJ3 882 aaPredicted RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 FAF2Q96CS3 445 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 OLFM1Q99784 485 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 SLC13A4Q9UKG4 626 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 EIF4E1BA6NMX2 242 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 USP17L5A8MUK1 530 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 MIF4GDA9UHW6 222 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 CA4P22748 312 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 PIGOQ8TEQ8 1089 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 PDS5AQ29RF7 1337 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 MED7O43513 233 aa12.23□□□□□ -0.45
CCBE1-202ENST00000439986 MTRF1O75570 445 aaKnown RBP12.23□□□□□ -0.45
CCBE1-202ENST00000439986 NR3C1P04150 777 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms