RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 FAM129AQ9BZQ8 928 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 FOXP3Q9BZS1 431 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 SEMA6BQ9H3T3 888 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 ETNK1Q9HBU6 452 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 KMT5AQ9NQR1 393 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 STRIP2Q9ULQ0 834 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 CARD8Q9Y2G2 431 aa6.75□□□□□ -1.33
BDNF-211ENST00000439476 USP17L15C9J2P7 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L13C9JLJ4 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L11C9JVI0 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L18D6R9N7 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L22D6RA61 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L17D6RBQ6 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L19D6RCP7 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L20D6RJB6 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 MYCP01106 439 aaPredicted RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 FAM153BP0C7A2 387 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 FDX1P10109 184 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 ESRRAP11474 423 aaPredicted RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 ALAS1P13196 640 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 SLC9A1P19634 815 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 PSMD7P51665 324 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 GALCP54803 685 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L24Q0WX57 530 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 DYNC1I2Q13409 638 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 TOMM20Q15388 145 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 ZYXQ15942 572 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 FAM153CQ494X1 144 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 SBK1Q52WX2 424 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 KLHDC7AQ5VTJ3 777 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 CENPPQ6IPU0 288 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 CCDC137Q6PK04 289 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 USP17L6PQ6QN14 398 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 SYDE1Q6ZW31 735 aaPredicted RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 FRMD5Q7Z6J6 570 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 RSPH3Q86UC2 560 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 ZNF34Q8IZ26 560 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 PIP4K2CQ8TBX8 421 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 DCAF4Q8WV16 495 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 RAPGEF5Q92565 580 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 FAM163AQ96GL9 167 aaPredicted RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 TRIM55Q9BYV6 548 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 COMMD8Q9NX08 183 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 FAM153AQ9UHL3 310 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 REXO2Q9Y3B8 237 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 MAD1L1Q9Y6D9 718 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 TYW5A2RUC4 315 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 RCCD1A6NED2 376 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 H0Y3Z8 333 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 KIAA0391O15091 583 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 PPIP5K2O43314 1243 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 CHEK2O96017 543 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 AGTP01019 485 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 DLATP10515 647 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 BMP3P12645 472 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 FGFR4P22455 802 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 CA4P22748 312 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 SERPINB4P48594 390 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 JAK3P52333 1124 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 ARL4CP56559 192 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 GPC5P78333 572 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 ARMCX2Q7L311 632 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 ANKRD13BQ86YJ7 626 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 METTL13Q8N6R0 699 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 MCPH1Q8NEM0 835 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 GIPC2Q8TF65 315 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 VPS39Q96JC1 886 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 ZMAT5Q9UDW3 170 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 LMTK3Q96Q04 1460 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 FAM205AQ6ZU69 1335 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 NPHP3-ACAD11A0A0J9YXS1 232 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 LRRIQ4A6NIV6 560 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 TCP11X1B4DZS4 312 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 GOLGA8MH3BSY2 632 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 KDM1AO60341 852 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 DIAPH2O60879 1101 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 KRT1P04264 644 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 SCNN1DP51172 638 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 WASHC5Q12768 1159 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 EIF2B5Q13144 721 aaKnown RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 TTMPQ5BVD1 217 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 KLC3Q6P597 504 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 TRPM8Q7Z2W7 1104 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 ZNF280CQ8ND82 737 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 NEDD1Q8NHV4 660 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 CENPTQ96BT3 561 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 MED10Q9BTT4 135 aa6.74□□□□□ -1.33
BDNF-211ENST00000439476 GCOM2Q9BZD3 368 aaPredicted RBP6.74□□□□□ -1.33
BDNF-211ENST00000439476 C3P01024 1663 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 KPNA7A9QM74 516 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ZBTB24O43167 697 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 CALB1P05937 261 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 FGFR2P21802 821 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 HOXA10P31260 410 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 SCTRP47872 440 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 AP3M2P53677 418 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 CTTNQ14247 550 aaKnown RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 CDCA2Q69YH5 1023 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 RSBN1LQ6PCB5 846 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 CRLF3Q8IUI8 442 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms