RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CLUHO75153 1309 aa20.27■□□□□ 0.83
AC004540.1-201ENST00000439120 MYO10Q9HD67 2058 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 CD2BP2O95400 341 aaKnown RBP20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 PSMD5Q16401 504 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 GLRA4Q5JXX5 417 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 RTP2Q5QGT7 225 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 ALYREFQ86V81 257 aaKnown RBP20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 MMTAG2Q9BU76 263 aaKnown RBP20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 MFSD1Q9H3U5 465 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 TMEM134Q9H6X4 195 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 WDR6Q9NNW5 1121 aaKnown RBP20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 ZDHHC7Q9NXF8 308 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 KCNG1Q9UIX4 513 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 KMT2EQ8IZD2 1858 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 WDFY4Q6ZS81 3184 aa20.26■□□□□ 0.83
AC004540.1-201ENST00000439120 MTCL1Q9Y4B5 1905 aaKnown RBP20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 OSTNP61366 133 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 RAD51AP2Q09MP3 1159 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 STRN3Q13033 797 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 IER5LQ5T953 404 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 LIN9Q5TKA1 542 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 LARP1BQ659C4 914 aaKnown RBP20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 C1orf186Q6ZWK4 172 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 KCNK18Q7Z418 384 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 DAW1Q8N136 415 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 KCTD17Q8N5Z5 321 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 PIK3R5Q8WYR1 880 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 UROC1Q96N76 676 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 PLIN2Q99541 437 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 ACO2Q99798 780 aaKnown RBP20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 RHOBTB2Q9BYZ6 727 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 CXCL16Q9H2A7 254 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 SMOC2Q9H3U7 446 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 ARHGAP28Q9P2N2 729 aa20.25■□□□□ 0.83
AC004540.1-201ENST00000439120 SLC16A4O15374 487 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 B3GAT3O94766 335 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 PDGFBP01127 241 aaPredicted RBP20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 GUCY2CP25092 1073 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 AVPR2P30518 371 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 GRM5P41594 1212 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 SMTNP53814 917 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 VCPP55072 806 aaKnown RBP20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 TDGQ13569 410 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 NAB2Q15742 525 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 ARL6IP4Q66PJ3 421 aaKnown RBP20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 PRSS33Q8NF86 280 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 TARS2Q9BW92 718 aaKnown RBP20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 CDT1Q9H211 546 aa20.24■□□□□ 0.83
AC004540.1-201ENST00000439120 SFI1A8K8P3 1242 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 TRAPPC3O43617 180 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 HARSP12081 509 aaKnown RBP20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 CLCNKBP51801 687 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 MAPK7Q13164 816 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 HYIQ5T013 277 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 LILRA6Q6PI73 481 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 DCLRE1AQ6PJP8 1040 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 CEP120Q8N960 986 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 ZNF707Q96C28 371 aaPredicted RBP20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 PPP1R10Q96QC0 940 aaKnown RBP20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 PRKD2Q9BZL6 878 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 KCNK12Q9HB15 430 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 SLC38A7Q9NVC3 462 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 IGSF9Q9P2J2 1179 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 MYH11P35749 1972 aa20.23■□□□□ 0.83
AC004540.1-201ENST00000439120 TMEM189-UBE2V1I3L0A0 370 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 ZMYND10O75800 440 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 MCF2P10911 925 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 PLS3P13797 630 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 MRE11P49959 708 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 MPZL3Q6UWV2 235 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 GET4Q7L5D6 327 aaPredicted RBP20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 SYT2Q8N9I0 419 aaPredicted RBP20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 LNX1Q8TBB1 728 aaPredicted RBP20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 CALML4Q96GE6 196 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 TBC1D32Q96NH3 1257 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 ACAP3Q96P50 834 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 PNMA5Q96PV4 448 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 CLSTN3Q9BQT9 956 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 KCND2Q9NZV8 630 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 ANKFY1Q9P2R3 1169 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 FBXL21Q9UKT6 434 aa20.22■□□□□ 0.83
AC004540.1-201ENST00000439120 TRIP11Q15643 1979 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 SMIM28A0A1B0GU29 152 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 PLA2G4BP0C869 781 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 UBA7P41226 1012 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 MATR3P43243 847 aaKnown RBP eCLIP20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 PPM1LQ5SGD2 360 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 TAS1R3Q7RTX0 852 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 RASSF8Q8NHQ8 419 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 SPIRE2Q8WWL2 714 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 DDX27Q96GQ7 796 aaKnown RBP20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 AK8Q96MA6 479 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 GOLGA2P5Q9HBQ8 144 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 PTPRHQ9HD43 1115 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 FBXW11Q9UKB1 542 aa20.21■□□□□ 0.83
AC004540.1-201ENST00000439120 H0YCG3 227 aa20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 N4BP1O75113 896 aaKnown RBP20.2■□□□□ 0.82
AC004540.1-201ENST00000439120 BMP15O95972 392 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms