RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 CHORDC1Q9UHD1 332 aaPredicted RBP14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 STXBP5LQ9Y2K9 1186 aa14.94□□□□□ -0.02
PTCHD3-201ENST00000438700 ANKRD63C9JTQ0 380 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 KRIT1O00522 736 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 NOP56O00567 594 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 NDUFAB1O14561 156 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 HSF2BPO75031 334 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 ITGBL1O95965 494 aaPredicted RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 TXNP10599 105 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 ADSSP30520 456 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 MXI1P50539 228 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 GUCY1A3Q02108 690 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 HLTFQ14527 1009 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 KIF22Q14807 665 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 ZNF792Q3KQV3 632 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 NAA35Q5VZE5 725 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 CCDC62Q6P9F0 684 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 TRIM50Q86XT4 487 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 MAP4K3Q8IVH8 894 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 SCFD2Q8WU76 684 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 TMEM143Q96AN5 459 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 POP1Q99575 1024 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 GPR20Q99678 358 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 NTPCRQ9BSD7 190 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 NIFKQ9BYG3 293 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 TMEM117Q9H0C3 514 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 AMFRQ9UKV5 643 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 IVNS1ABPQ9Y6Y0 642 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 NCANO14594 1321 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 SART1O43290 800 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 RTP1P59025 263 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 PRPF4BQ13523 1007 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 SNRNP35Q16560 246 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 EPC2Q52LR7 807 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 ADAT2Q7Z6V5 191 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 DDX42Q86XP3 938 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 C12orf56Q8IXR9 622 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 DHX37Q8IY37 1157 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 PPM1KQ8N3J5 372 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 HVCN1Q96D96 273 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 HES6Q96HZ4 224 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 IFT74Q96LB3 600 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 SPATA33Q96N06 139 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 AGPAT1Q99943 283 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 DHX33Q9H6R0 707 aaKnown RBP14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 AZI2Q9H6S1 392 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 COG5Q9UP83 839 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 EXOC7Q9UPT5 735 aa14.93□□□□□ -0.02
PTCHD3-201ENST00000438700 ATP8B3O60423 1300 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 MARK3P27448 753 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 SEC24CP53992 1094 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 SLC7A3Q8WY07 619 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 GLG1Q92896 1179 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 RNPC3Q96LT9 517 aaKnown RBP14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 NRBP2Q9NSY0 501 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 AMACRQ9UHK6 382 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 GOLGA8KD6RF30 607 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 RFX1P22670 979 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 CNGA1P29973 690 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 NNTQ13423 1086 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 TTLL4Q14679 1199 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 DCAF12L1Q5VU92 463 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 GPR142Q7Z601 462 aa14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 RPUSD2Q8IZ73 545 aaKnown RBP14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 MYCBPQ99417 103 aaPredicted RBP14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 TOPORSQ9NS56 1045 aaPredicted RBP14.92□□□□□ -0.02
PTCHD3-201ENST00000438700 FGGP02679 453 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 TARBP2Q15633 366 aaKnown RBP14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 ABRAQ8N0Z2 381 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 ASAP3Q8TDY4 903 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 TMEM174Q8WUU8 243 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 SEMA4DQ92854 862 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 FAM84AQ96KN4 292 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 ANKRD62A6NC57 917 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 ZNF233A6NK53 670 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 ATMINO43313 823 aaPredicted RBP14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 STRNO43815 780 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 FTLP02792 175 aaPredicted RBP14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 SNRPFP62306 86 aaKnown RBP14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 ZNF211Q13398 564 aaPredicted RBP14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 FAM110CQ1W6H9 321 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 FMNL3Q8IVF7 1028 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 ARHGAP28Q9P2N2 729 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 NR2E1Q9Y466 385 aa14.91□□□□□ -0.02
PTCHD3-201ENST00000438700 TMEM110-MUSTN1A8MSY1 372 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 LGR5O75473 907 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 SGPL1O95470 568 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 RFC5P40937 340 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 FNTAP49354 379 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 GJC2Q5T442 439 aaPredicted RBP14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 SWT1Q5T5J6 900 aaKnown RBP14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 CFAP58Q5T655 872 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 ALS2CLQ60I27 953 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 TAS1R3Q7RTX0 852 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 RASGEF1CQ8N431 466 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 FAM167AQ96KS9 214 aa14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 CALR3Q96L12 384 aaKnown RBP14.9□□□□□ -0.02
PTCHD3-201ENST00000438700 CELF4Q9BZC1 486 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms