RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PRPSAP2O60256 369 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 SNRPFP62306 86 aaKnown RBP7.1□□□□□ -1.27
CSDE1-205ENST00000438362 P3H1Q32P28 736 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 AP1ARQ63HQ0 302 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 ZNF354CQ86Y25 554 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 KIF2BQ8N4N8 673 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 ATP8B4Q8TF62 1192 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 NUDCD1Q96RS6 583 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 FAM167BQ9BTA0 163 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 RBAKQ9NYW8 714 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-205ENST00000438362 STRIP2Q9ULQ0 834 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 MYO3BQ8WXR4 1341 aa7.1□□□□□ -1.27
CSDE1-205ENST00000438362 MED1Q15648 1581 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-205ENST00000438362 TRAPPC3O43617 180 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 KIF1CO43896 1103 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ZWINTO95229 277 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SGPL1O95470 568 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ZBED1O96006 694 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 KRT7P08729 469 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 MUTP22033 750 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CCND1P24385 295 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SHMT1P34896 483 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ARFIP2P53365 341 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 RAD23BP54727 409 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 OSTNP61366 133 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 TMPRSS15P98073 1019 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ITGB3BPQ13352 177 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 TFDP2Q14188 446 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 GRIK5Q16478 980 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 OR6B2Q6IFH4 312 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CFAP36Q96G28 342 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 IFT122Q9HBG6 1241 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 BATF3Q9NR55 127 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 RNF146Q9NTX7 359 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 PPARGC1AQ9UBK2 798 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SRRM3A6NNA2 597 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 IGF2BP3O00425 579 aaKnown RBP eCLIP7.09□□□□□ -1.273e-6■■■□□ 19.1
CSDE1-205ENST00000438362 FANCGO15287 622 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 GSTA1P08263 222 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SRGAP2CP0DJJ0 459 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SERPINB6P35237 376 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 MAGEA4P43358 317 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SLC12A3P55017 1021 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 RBBP5Q15291 538 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 VPS72Q15906 364 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 HIF1AQ16665 826 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SLC27A3Q5K4L6 730 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 C11orf63Q6NUN7 778 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 YTHDF3Q7Z739 585 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 AGGF1Q8N302 714 aaeCLIP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 NSUN6Q8TEA1 469 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SLC20A1Q8WUM9 679 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 HSPH1Q92598 858 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 FAF2Q96CS3 445 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ERP27Q96DN0 273 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 BTBD6Q96KE9 485 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CBWD1Q9BRT8 395 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 PAGR1Q9BTK6 254 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 POLR3FQ9H1D9 316 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 QTRT2Q9H974 415 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 DDX56Q9NY93 547 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ANGPTL2Q9UKU9 493 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 NEU2Q9Y3R4 380 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CHD2O14647 1828 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 BTNL10A8MVZ5 291 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 TOM1L1O75674 476 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 LCA5LO95447 670 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SSTR3P32745 418 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 GARSP41250 739 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CASP5P51878 434 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 COPS2P61201 443 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CENPCQ03188 943 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 MYBPC2Q14324 1141 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 EPC2Q52LR7 807 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ANKRD20A8PQ5CZ79 823 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ZNF667Q5HYK9 610 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 ACAD10Q6JQN1 1059 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 KRT27Q7Z3Y8 459 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 THNSL1Q8IYQ7 743 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 RCOR2Q8IZ40 523 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 C4orf33Q8N1A6 199 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 RIBC1Q8N443 379 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 RNF34Q969K3 372 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SH3GL2Q99962 352 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 FAM118BQ9BPY3 351 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 TRIM4Q9C037 500 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CDC42EP4Q9H3Q1 356 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 UNC45AQ9H3U1 944 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 KLHL11Q9NVR0 708 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 SLC9A2Q9UBY0 812 aa7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CNOT7Q9UIV1 285 aaKnown RBP7.09□□□□□ -1.27
CSDE1-205ENST00000438362 CFAP69A5D8W1 941 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 AGPSO00116 658 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 CLGNO14967 610 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 C21orf2O43822 256 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 DGAT1O75907 488 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 GHRP10912 638 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 RALAP11233 206 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 CNGA1P29973 690 aa7.09□□□□□ -1.28
CSDE1-205ENST00000438362 COG2Q14746 738 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms