RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 N4BP3O15049 544 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 SLC16A4O15374 487 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 MEFVO15553 781 aaPredicted RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 RECQL4O94761 1208 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 EFEMP2O95967 443 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 BMP15O95972 392 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 IGFBP6P24592 240 aaPredicted RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 LONP1P36776 959 aaKnown RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 ALDH7A1P49419 539 aaKnown RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 MARSP56192 900 aaKnown RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 RNASELQ05823 741 aaKnown RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 AAK1Q2M2I8 961 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 PTCRAQ6ISU1 281 aaPredicted RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 GPBP1Q86WP2 473 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 HSCBQ8IWL3 235 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 VPS52Q8N1B4 723 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 CNNM3Q8NE01 707 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 URGCPQ8TCY9 931 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 GIPC2Q8TF65 315 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 RABGGTAQ92696 567 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 RAD54LQ92698 747 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 SYMPKQ92797 1274 aaKnown RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 KHSRPQ92945 711 aaKnown RBP eCLIP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 IFT74Q96LB3 600 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 AK8Q96MA6 479 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 REEP2Q9BRK0 252 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 PAAF1Q9BRP4 392 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 CCSER1Q9C0I3 900 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 NT5C3AQ9H0P0 336 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 TLE6Q9H808 572 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 ENTPD7Q9NQZ7 604 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 SNTG2Q9NY99 539 aa9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 PRG3Q9Y2Y8 225 aaPredicted RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 SRPRBQ9Y5M8 271 aaKnown RBP9.4□□□□□ -0.9
HERPUD2-206ENST00000438224 SCN1AP35498 2009 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 ZMYM2Q9UBW7 1377 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 TECTAO75443 2155 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 NRP1O14786 923 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 MBTPS2O43462 519 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 SLC26A4O43511 780 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 PLS3P13797 630 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 PROZP22891 400 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 UBA7P41226 1012 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 NASPP49321 788 aaPredicted RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 EFNA5P52803 228 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 DMP1Q13316 513 aaPredicted RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 DHX8Q14562 1220 aaKnown RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 SLC39A14Q15043 492 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 NAB2Q15742 525 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 ATF7IP2Q5U623 682 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 TAS1R1Q7RTX1 841 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 TMC7Q7Z402 723 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 DDX53Q86TM3 631 aaKnown RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 FAM178BQ8IXR5 827 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 RNF168Q8IYW5 571 aaPredicted RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 MRPL43Q8N983 215 aaKnown RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 TMEM161BQ8NDZ6 487 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 MICAL1Q8TDZ2 1067 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 RSPH1Q8WYR4 309 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 TMEM169Q96HH4 297 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 CDK5RAP3Q96JB5 506 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 CHAMP1Q96JM3 812 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 ZBTB45Q96K62 511 aaPredicted RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 DRC1Q96MC2 740 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 FIZ1Q96SL8 496 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 ACO2Q99798 780 aaKnown RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 TMEM175Q9BSA9 504 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 NTPCRQ9BSD7 190 aaKnown RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 TARS2Q9BW92 718 aaKnown RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 TRIM6Q9C030 488 aaPredicted RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 CDT1Q9H211 546 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 PTPRHQ9HD43 1115 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 KMT5AQ9NQR1 393 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 CDH22Q9UJ99 828 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 GDAQ9Y2T3 454 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 GIT1Q9Y2X7 761 aa9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 MORC2Q9Y6X9 1032 aaPredicted RBP9.39□□□□□ -0.91
HERPUD2-206ENST00000438224 K7ERI5 159 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 SMAPO00193 183 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 TNFRSF10AO00220 468 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 CLASP2O75122 1294 aaKnown RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 ZSCAN22P10073 491 aaPredicted RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 CTSAP10619 480 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 MAPTP10636 758 aaKnown RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 NDUFV1P49821 464 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 ZNF131P52739 623 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 NCKAP1LP55160 1127 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 KRT17Q04695 432 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 NCBP1Q09161 790 aaKnown RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 GIT2Q14161 759 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 PTPN14Q15678 1187 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 PDE12Q6L8Q7 609 aaKnown RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 LLGL2Q6P1M3 1020 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 SYCE2Q6PIF2 218 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 TMEM130Q8N3G9 435 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 LINC00301Q8NCQ3 95 aa9.38□□□□□ -0.91
HERPUD2-206ENST00000438224 SMRP1Q8NCR6 262 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms