RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 NUB1Q9Y5A7 615 aa7.34□□□□□ -1.23
SPEN-202ENST00000438066 SPATA31A5Q5VU36 1347 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 SPATA31A7Q8IWB4 1347 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 A0A1W2PQ27 194 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 A0A1W2PQ64 194 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 A0A1W2PQC6 194 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 A0A1W2PQD8 194 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 RASA4BC9J798 803 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 RASA4O43374 803 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 SURF6O75683 361 aaKnown RBP7.33□□□□□ -1.24
SPEN-202ENST00000438066 BCAR1P56945 870 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 BIRC3Q13489 604 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 SLC9A5Q14940 896 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 ALFQ53S48 1182 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 TIGD7Q6NT04 549 aaPredicted RBP7.33□□□□□ -1.24
SPEN-202ENST00000438066 SWSAP1Q6NVH7 229 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 UNQ6494/PRO21346Q6UXR6 183 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 PLD6Q8N2A8 252 aaKnown RBP7.33□□□□□ -1.24
SPEN-202ENST00000438066 DEPTORQ8TB45 409 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 KIF1BPQ96EK5 621 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 MAP6Q96JE9 813 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 RIPOR3Q96MK2 946 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 BICC1Q9H694 974 aaKnown RBP7.33□□□□□ -1.24
SPEN-202ENST00000438066 MYOTQ9UBF9 498 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 TMPRSS11EQ9UL52 423 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 ASAP1Q9ULH1 1129 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 NUP98P52948 1817 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 COL5A3P25940 1745 aaPredicted RBP7.33□□□□□ -1.24
SPEN-202ENST00000438066 PITPNM2Q9BZ72 1349 aa7.33□□□□□ -1.24
SPEN-202ENST00000438066 USP42Q9H9J4 1324 aaKnown RBP7.33□□□□□ -1.24
SPEN-202ENST00000438066 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 CAPN8A6NHC0 703 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 HGSO14964 777 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 HTRA2O43464 458 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 A1BGP04217 495 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 EDNRBP24530 442 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 PIK3CBP42338 1070 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 EMC4Q5J8M3 183 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 PRAMEF9Q5VWM5 478 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 CCDC70Q6NSX1 233 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 SLCO6A1Q86UG4 719 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 MARCH10Q8NA82 808 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 HIPK4Q8NE63 616 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 NLGN2Q8NFZ4 835 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 CLEC4DQ8WXI8 215 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 FOXRED1Q96CU9 486 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 ACE2Q9BYF1 805 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 RAXQ9Y2V3 346 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 PCDHGB3Q9Y5G1 929 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 MYH3P11055 1940 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 BCL9LQ86UU0 1499 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 THSD7AQ9UPZ6 1657 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 A0A1W2PQ45 241 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 A0A1W2PQY0 241 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 EXOC5O00471 708 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 KPNA5O15131 536 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 SLC26A4O43511 780 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 USP2O75604 605 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 AGFG1P52594 562 aaKnown RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 GRIN1Q05586 938 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 BECN1Q14457 450 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 C3orf36Q3SXR2 165 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 RABL6Q3YEC7 729 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 EPHA10Q5JZY3 1008 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 TTC38Q5R3I4 469 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 TSHZ3Q63HK5 1081 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 CCDC174Q6PII3 467 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 LMBR1LQ6UX01 489 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 DAAM2Q86T65 1068 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 RTN4RL1Q86UN2 441 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 CILP2Q8IUL8 1156 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 SLC41A1Q8IVJ1 513 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 NKAPQ8N5F7 415 aaKnown RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 OR2C3Q8N628 320 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 LRTOMTQ8WZ04 291 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 SYTL4Q96C24 671 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 SENP7Q9BQF6 1050 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 G6PC3Q9BUM1 346 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 SELENOOQ9BVL4 669 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 TMX4Q9H1E5 349 aaPredicted RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 NUP62CLQ9H1M0 184 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 IL1RAPL2Q9NP60 686 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 ARFGAP3Q9NP61 516 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 MAP3K20Q9NYL2 800 aaKnown RBP7.32□□□□□ -1.24
SPEN-202ENST00000438066 IMPACTQ9P2X3 320 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 EBF1Q9UH73 591 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 DGKBQ9Y6T7 804 aa7.32□□□□□ -1.24
SPEN-202ENST00000438066 JCADQ9P266 1359 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 MYH14Q7Z406 1995 aaKnown RBP7.31□□□□□ -1.24
SPEN-202ENST00000438066 CFAP69A5D8W1 941 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 RNF225M0QZC1 329 aaPredicted RBP7.31□□□□□ -1.24
SPEN-202ENST00000438066 RTP1P59025 263 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 MYBPC3Q14896 1274 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 ERC1Q8IUD2 1116 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 LYSMD2Q8IV50 215 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 KRT78Q8N1N4 520 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 NRG4Q8WWG1 115 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 ATXN2LQ8WWM7 1075 aaKnown RBP7.31□□□□□ -1.24
SPEN-202ENST00000438066 CCT6BQ92526 530 aa7.31□□□□□ -1.24
SPEN-202ENST00000438066 TEX13AQ9BXU3 409 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms