RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 ZSWIM1Q9BR11 485 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 TBC1D22BQ9NU19 505 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 FAM187AA6NFU0 413 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 I3L4J1 428 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 GRAP2O75791 330 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 BRD2P25440 801 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 MAN1A1P33908 653 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 RPL21P46778 160 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 MUM1Q2TAK8 710 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 FAM182AQ5T1J6 154 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 NME8Q8N427 588 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 PYROXD1Q8WU10 500 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 ATG4CQ96DT6 458 aa12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 DDX20Q9UHI6 824 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-206ENST00000437932 CCDC160A6NGH7 325 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 DCDC2CA8MYV0 355 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 ANKRD63C9JTQ0 380 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 TAS1R2Q8TE23 839 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 MRPL47Q9HD33 250 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 TBX20Q9UMR3 447 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 MYH8P13535 1937 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 TMEM120BA0PK00 339 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 CNGA1P29973 690 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 LLGL2Q6P1M3 1020 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 LRRC71Q8N4P6 559 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 CFAP57Q96MR6 1250 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 ACTR5Q9H9F9 607 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 ANKRD20A3Q5VUR7 823 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 NLRP7Q8WX94 980 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 RUBCNQ92622 972 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 ERVK-5Q9HDB9 667 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 BPIFB4P59827 614 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 PRKCEQ02156 737 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 PPATQ06203 517 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 NEDD9Q14511 834 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 PPP6R3Q5H9R7 873 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 P3H4Q92791 437 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 MYCBPQ99417 103 aaPredicted RBP12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 SLC9A2Q9UBY0 812 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 MYH13Q9UKX3 1938 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 IGSF9BQ9UPX0 1349 aa12.4□□□□□ -0.42
PDLIM5-206ENST00000437932 INHBAP08476 426 aa12.4□□□□□ -0.43
PDLIM5-206ENST00000437932 NOP14P78316 857 aaKnown RBP12.4□□□□□ -0.43
PDLIM5-206ENST00000437932 PHLDB3Q6NSJ2 640 aa12.4□□□□□ -0.43
PDLIM5-206ENST00000437932 JPH1Q9HDC5 661 aaPredicted RBP12.4□□□□□ -0.43
PDLIM5-206ENST00000437932 GAKO14976 1311 aa12.4□□□□□ -0.43
PDLIM5-206ENST00000437932 ARHGAP42A6NI28 874 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 PIAS1O75925 651 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 FAM107AO95990 144 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 PPP2R5AQ15172 486 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 ZNF699Q32M78 642 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 ATP8B4Q8TF62 1192 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 RAB3IPQ96QF0 476 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 ADPGKQ9BRR6 497 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 HERC5Q9UII4 1024 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 G3BP2Q9UN86 482 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 PCDHA10Q9Y5I2 948 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 CYP11B1P15538 503 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 MAPK7Q13164 816 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 ALCAMQ13740 583 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 KCNT1Q5JUK3 1230 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 FAM160B1Q5W0V3 765 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 IRF2BP2Q7Z5L9 587 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 TMC3Q7Z5M5 1100 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 SCYL3Q8IZE3 742 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 MED10Q9BTT4 135 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 CIB2O75838 187 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 HSPA9P38646 679 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 CAP2P40123 477 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 PPP3CAQ08209 521 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 NOP9Q86U38 636 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 PALB2Q86YC2 1186 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 GMCL1P1Q8NEA9 526 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 IL31RAQ8NI17 732 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 ETNPPLQ8TBG4 499 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 TSNARE1Q96NA8 513 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 HLA-DRAP01903 254 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 HSPA6P17066 643 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 FAF2Q96CS3 445 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 TRIM11Q96F44 468 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 TRAF3IP3Q9Y228 551 aa12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 N4BP2Q86UW6 1770 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-206ENST00000437932 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 FAM53CQ9NYF3 392 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 TAF1P21675 1872 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 M0QYV0 167 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 CSDE1O75534 798 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 RNF8O76064 485 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 TJP3O95049 919 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 NPTX2P47972 431 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 MCF2LO15068 1137 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 QPCTQ16769 361 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 DCAF15Q66K64 600 aa12.38□□□□□ -0.43
PDLIM5-206ENST00000437932 SLC13A5Q86YT5 568 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms