RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 MYADML2A6NDP7 307 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 SIM1P81133 766 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 ZNF169Q14929 603 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 TKFCQ3LXA3 575 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 CT83Q5H943 113 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 RRP12Q5JTH9 1297 aaKnown RBP4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 PAPD7Q5XG87 772 aaKnown RBP4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 Q6ZNX1 250 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 C16orf86Q6ZW13 317 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 MED25Q71SY5 747 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 ARHGEF25Q86VW2 580 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 DHX37Q8IY37 1157 aaKnown RBP4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 TMEM132CQ8N3T6 1108 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 REPS2Q8NFH8 660 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 FUBP3Q96I24 572 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 ZSWIM1Q9BR11 485 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 RNPEPQ9H4A4 650 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 ALG13Q9NP73 1137 aaKnown RBP4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 CASS4Q9NQ75 786 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 TBCCD1Q9NVR7 557 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 LRIT1Q9P2V4 623 aa4.67□□□□□ -1.66
HMGB1P31-201ENST00000437242 AKR1B10O60218 316 aa4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 ELANEP08246 267 aa4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 OCA2Q04671 838 aa4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 ZNF362Q5T0B9 420 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 B3GNTL1Q67FW5 361 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 ZNF572Q7Z3I7 529 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 RASSF3Q86WH2 238 aa4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 TRMT2AQ8IZ69 625 aaKnown RBP4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 ZNF384Q8TF68 577 aa4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 APPBP2Q92624 585 aa4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 RNPC3Q96LT9 517 aaKnown RBP4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 GALNT9Q9HCQ5 603 aa4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 ARHGEF17Q96PE2 2063 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 SALL3Q9BXA9 1300 aa4.66□□□□□ -1.66
HMGB1P31-201ENST00000437242 A0A1B0GTW7 788 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 MGST3O14880 152 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 ADSLP30566 484 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 CXADRP78310 365 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 MRPS35P82673 323 aaKnown RBP4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 NHLH1Q02575 133 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 UGT8Q16880 541 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 ATP13A4Q4VNC1 1196 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 FBXO18Q8NFZ0 1043 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 OR7D4Q8NG98 312 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 ACTRT2Q8TDY3 377 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 EAF2Q96CJ1 260 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 UHRF1Q96T88 793 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 BCO1Q9HAY6 547 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 SEMA4GQ9NTN9 838 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 FANCLQ9NW38 375 aa4.65□□□□□ -1.67
HMGB1P31-201ENST00000437242 RBMXL2O75526 392 aaKnown RBP4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 MATN4O95460 622 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 RAP2AP10114 183 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 ALOX15P16050 662 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 FGFR4P22455 802 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 ECHS1P30084 290 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 RARRES1P49788 294 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 CACNA2D1P54289 1103 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 SP140Q13342 867 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 CCDC144BQ3MJ40 725 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 GJC2Q5T442 439 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 FAM43AQ8N2R8 423 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 RIN2Q8WYP3 895 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 FUBP1Q96AE4 644 aaKnown RBP4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 MFSD3Q96ES6 412 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 HEPHQ9BQS7 1158 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 MRI1Q9BV20 369 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 TMEM74BQ9NUR3 256 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 DPP7Q9UHL4 492 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 KCNE5Q9UJ90 142 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 EDARQ9UNE0 448 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 DMTF1Q9Y222 760 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 PLAAQ9Y263 795 aa4.64□□□□□ -1.67
HMGB1P31-201ENST00000437242 GPANK1O95872 356 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 ATP5JP18859 108 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 HSD11B2P80365 405 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 CDK17Q00537 523 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 FOXF2Q12947 444 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 PDCD1Q15116 288 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 FSCN1Q16658 493 aaKnown RBP4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 AFMIDQ63HM1 303 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 FOXR2Q6PJQ5 311 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 FAM180AQ6UWF9 173 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 SRRM1Q8IYB3 904 aaKnown RBP4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 BOD1Q96IK1 185 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 RAX2Q96IS3 184 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 ACAP3Q96P50 834 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 FEZ1Q99689 392 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 AIFM2Q9BRQ8 373 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 MOCS1Q9NZB8 636 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 FOXJ2Q9P0K8 574 aa4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 MTO1Q9Y2Z2 717 aaKnown RBP4.63□□□□□ -1.67
HMGB1P31-201ENST00000437242 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 CDC45O75419 566 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 POMCP01189 267 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 ITGB6P18564 788 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 ENPP1P22413 925 aa4.62□□□□□ -1.67
HMGB1P31-201ENST00000437242 GCSHP23434 173 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms