RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 NXF3Q9H4D5 531 aaKnown RBP18.25■□□□□ 0.51
HMGN1P19-201ENST00000436976 ZNF334Q9HCZ1 680 aaPredicted RBP18.25■□□□□ 0.51
HMGN1P19-201ENST00000436976 RBM12Q9NTZ6 932 aaKnown RBP18.25■□□□□ 0.51
HMGN1P19-201ENST00000436976 PIAS3Q9Y6X2 628 aa18.25■□□□□ 0.51
HMGN1P19-201ENST00000436976 SF3B1O75533 1304 aaKnown RBP eCLIP18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 HELZ2Q9BYK8 2649 aaKnown RBP18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 DDX11L8A8MPP1 907 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 TADA2AO75478 443 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 EPN2O95208 641 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 FOXC1Q12948 553 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 PTGDRQ13258 359 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 UVSSAQ2YD98 709 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 LRCH2Q5VUJ6 765 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 APOA5Q6Q788 366 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 B3GNT9Q6UX72 402 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 Q6ZS52 159 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 MIER3Q7Z3K6 550 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 ZNF579Q8NAF0 562 aaKnown RBP18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 PRPF31Q8WWY3 499 aaKnown RBP18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 CPB2Q96IY4 423 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 TEKT3Q9BXF9 490 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 RBM28Q9NW13 759 aaKnown RBP18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 GIT1Q9Y2X7 761 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 BPTFQ12830 3046 aa18.24■□□□□ 0.51
HMGN1P19-201ENST00000436976 NCANO14594 1321 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 TMEM8BA6NDV4 472 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 SGSM2O43147 1006 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 TSPAN1O60635 241 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 PSMD10O75832 226 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 RAP1GAPP47736 663 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 NPEPPSP55786 919 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 HSP90AA2PQ14568 343 aaPredicted RBP18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 FAM78AQ5JUQ0 283 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 PLA2G2CQ5R387 149 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 FAM171A1Q5VUB5 890 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 CEP57Q86XR8 500 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 REXO1Q8N1G1 1221 aaKnown RBP18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 TMEM143Q96AN5 459 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 TRMT61BQ9BVS5 477 aaKnown RBP18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 ZMYND12Q9H0C1 365 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 TRPV5Q9NQA5 729 aa18.23■□□□□ 0.51
HMGN1P19-201ENST00000436976 ESYT2A0FGR8 921 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 TAF4O00268 1085 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 KIF4AO95239 1232 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 AKAP5P24588 427 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 CCNE1P24864 410 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 GDI1P31150 447 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 NOVA1P51513 510 aaKnown RBP18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 LAMTOR4Q0VGL1 99 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 GRIK3Q13003 919 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 RAB33AQ14088 237 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 RTN1Q16799 776 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 PRSS36Q5K4E3 855 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 VITQ6UXI7 678 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 RDM1Q8NG50 284 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 IRF7Q92985 503 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 TCEAL4Q96EI5 215 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 AVENQ9NQS1 362 aaPredicted RBP18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 ABCA7Q8IZY2 2146 aa18.22■□□□□ 0.51
HMGN1P19-201ENST00000436976 IGHDP01880 384 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 OR1D2P34982 312 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 ZNF252P-AS1Q0IIN9 211 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 PFKFB3Q16875 520 aaPredicted RBP18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 TCEAL6Q6IPX3 200 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 WDR5BQ86VZ2 330 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 RNF149Q8NC42 400 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 PSPC1Q8WXF1 523 aaKnown RBP18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 TCEAL3Q969E4 200 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 LOXL4Q96JB6 756 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 CCDC136Q96JN2 1154 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 JPH2Q9BR39 696 aaPredicted RBP18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 CSRNP2Q9H175 543 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 ZFP14Q9HCL3 533 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 BMP2KQ9NSY1 1161 aaPredicted RBP18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 KLK14Q9P0G3 267 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 BRPF3Q9ULD4 1205 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 CACNA1EQ15878 2313 aa18.21■□□□□ 0.51
HMGN1P19-201ENST00000436976 CASTOR2A6NHX0 329 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 ARNTLO00327 626 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 ERLIN2O94905 339 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 CDC27P30260 824 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 RNF43Q68DV7 783 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 NOTUMQ6P988 496 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 KBTBD6Q86V97 674 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 ZCCHC14Q8WYQ9 949 aaKnown RBP18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 CCDC51Q96ER9 411 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 ASB16Q96NS5 453 aa18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 DHX33Q9H6R0 707 aaKnown RBP18.2■□□□□ 0.5
HMGN1P19-201ENST00000436976 ZIC2O95409 532 aaPredicted RBP18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 PSMC3P17980 439 aa18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 IGFBP6P24592 240 aaPredicted RBP18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 AXLP30530 894 aa18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 HOXA6P31267 233 aa18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 CCR2P41597 374 aa18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 AMHR2Q16671 573 aa18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 CDR2LQ86X02 465 aaPredicted RBP18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 ZSWIM3Q96MP5 696 aa18.19■□□□□ 0.5
HMGN1P19-201ENST00000436976 SCNM1Q9BWG6 230 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms