RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 ATXN2LQ8WWM7 1075 aaKnown RBP12.51□□□□□ -0.41
COL28A1-203ENST00000435823 ACCSQ96QU6 501 aa12.51□□□□□ -0.41
COL28A1-203ENST00000435823 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
COL28A1-203ENST00000435823 MSTO1Q9BUK6 570 aa12.51□□□□□ -0.41
COL28A1-203ENST00000435823 IGFLR1Q9H665 355 aa12.51□□□□□ -0.41
COL28A1-203ENST00000435823 TLE6Q9H808 572 aa12.51□□□□□ -0.41
COL28A1-203ENST00000435823 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
COL28A1-203ENST00000435823 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
COL28A1-203ENST00000435823 HPSEQ9Y251 543 aa12.51□□□□□ -0.41
COL28A1-203ENST00000435823 COL6A3P12111 3177 aa12.51□□□□□ -0.41
COL28A1-203ENST00000435823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
COL28A1-203ENST00000435823 GOLGA6L4A6NEF3 574 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 PPP1R37O75864 691 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 SYKP43405 635 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 NRIP1P48552 1158 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 MRPS5P82675 430 aaKnown RBP12.5□□□□□ -0.41
COL28A1-203ENST00000435823 HYAL1Q12794 435 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 GLRA4Q5JXX5 417 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 L1TD1Q5T7N2 865 aaKnown RBP12.5□□□□□ -0.41
COL28A1-203ENST00000435823 CNNM4Q6P4Q7 775 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 UNC13DQ70J99 1090 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 ADGRD2Q7Z7M1 963 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 RBM23Q86U06 439 aaKnown RBP12.5□□□□□ -0.41
COL28A1-203ENST00000435823 SYCP3Q8IZU3 236 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 FSIP1Q8NA03 581 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 TMEM87AQ8NBN3 555 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 BCL7CQ8WUZ0 217 aaPredicted RBP12.5□□□□□ -0.41
COL28A1-203ENST00000435823 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
COL28A1-203ENST00000435823 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 SNX27Q96L92 541 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 TMEM206Q9H813 350 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 UBE2ZQ9H832 354 aaPredicted RBP12.5□□□□□ -0.41
COL28A1-203ENST00000435823 SLC38A7Q9NVC3 462 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 CLDND1Q9NY35 253 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 PCDHGC5Q9Y5F6 944 aa12.5□□□□□ -0.41
COL28A1-203ENST00000435823 A0A0B4J269 797 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 FAM237AA0A1B0GTK4 181 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 SMIM28A0A1B0GU29 152 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 CASTOR2A6NHX0 329 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 OGTO15294 1046 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 ACTN4O43707 911 aaKnown RBP12.49□□□□□ -0.41
COL28A1-203ENST00000435823 TADA2AO75478 443 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 CLTAP09496 248 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 MYBP10242 640 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 CTSAP10619 480 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 NDUFA8P51970 172 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
COL28A1-203ENST00000435823 POSTNQ15063 836 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 DUSP6Q16828 381 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 SEZ6Q53EL9 994 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 XKR4Q5GH76 650 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 CCDC34Q96HJ3 373 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 UROC1Q96N76 676 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 PPP1R10Q96QC0 940 aaKnown RBP12.49□□□□□ -0.41
COL28A1-203ENST00000435823 HERC2P3Q9BVR0 1158 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 STRA6Q9BX79 667 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 ZBP1Q9H171 429 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 CXCL16Q9H2A7 254 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 BLZF1Q9H2G9 400 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 MARCH5Q9NX47 278 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 CNTN3Q9P232 1028 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 ADAM28Q9UKQ2 775 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 MYO7AQ13402 2215 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 CITO14578 2027 aa12.49□□□□□ -0.41
COL28A1-203ENST00000435823 SF3B1O75533 1304 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL28A1-203ENST00000435823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.48□□□□□ -0.41
COL28A1-203ENST00000435823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.48□□□□□ -0.41
COL28A1-203ENST00000435823 PVALEFA0A1B0GWK0 134 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 PER2O15055 1255 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 CXCL14O95715 111 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 SOD2P04179 222 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 MYL1P05976 194 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 URODP06132 367 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 SRGAP2BP0DMP2 458 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 CXCL8P10145 99 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 KCNE1P15382 129 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 KCNA5P22460 613 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 TIE1P35590 1138 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 NDUFV1P49821 464 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 CASP5P51878 434 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 TFF2Q03403 129 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 PPP2R3AQ06190 1150 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 COL19A1Q14993 1142 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 TJAP1Q5JTD0 557 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 FAM26FQ5R3K3 315 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 FUT10Q6P4F1 479 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 SLC39A4Q6P5W5 647 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 ALKAL1Q6UXT8 129 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 EFHBQ8N7U6 833 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 MRPL43Q8N983 215 aaKnown RBP12.48□□□□□ -0.41
COL28A1-203ENST00000435823 POMGNT1Q8WZA1 660 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 DDX27Q96GQ7 796 aaKnown RBP12.48□□□□□ -0.41
COL28A1-203ENST00000435823 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 ASB2Q96Q27 587 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 HAPLN2Q9GZV7 340 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 RPF1Q9H9Y2 349 aaKnown RBP12.48□□□□□ -0.41
COL28A1-203ENST00000435823 PLEKHA5Q9HAU0 1116 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 MRPL17Q9NRX2 175 aaKnown RBP12.48□□□□□ -0.41
COL28A1-203ENST00000435823 CHMP5Q9NZZ3 219 aa12.48□□□□□ -0.41
COL28A1-203ENST00000435823 SSX2IPQ9Y2D8 614 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms