RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 DGKKQ5KSL6 1271 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 TANGO2Q6ICL3 276 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 PDXDC1Q6P996 788 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 MTHFD1LQ6UB35 978 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 SYNE3Q6ZMZ3 975 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 SEPT1Q8WYJ6 367 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 TNPO1Q92973 898 aaKnown RBP9.21□□□□□ -0.94
NCSTN-206ENST00000435149 IRF7Q92985 503 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 CUL5Q93034 780 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 TATDN2Q93075 761 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 OSMRQ99650 979 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 SENP7Q9BQF6 1050 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 ZNF334Q9HCZ1 680 aaPredicted RBP9.21□□□□□ -0.94
NCSTN-206ENST00000435149 TBC1D13Q9NVG8 400 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 COL4A2P08572 1712 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 ASCC3Q8N3C0 2202 aaKnown RBP9.21□□□□□ -0.94
NCSTN-206ENST00000435149 ZMYM2Q9UBW7 1377 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 WDR81Q562E7 1941 aa9.21□□□□□ -0.94
NCSTN-206ENST00000435149 COL5A1P20908 1838 aaPredicted RBP9.2□□□□□ -0.94
NCSTN-206ENST00000435149 ERVH48-1M5A8F1 160 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 EXTL3O43909 919 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 MAFO75444 373 aaPredicted RBP9.2□□□□□ -0.94
NCSTN-206ENST00000435149 STAM2O75886 525 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 MAPK8P45983 427 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 MRPS9P82933 396 aaKnown RBP9.2□□□□□ -0.94
NCSTN-206ENST00000435149 GRM2Q14416 872 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 WDR44Q5JSH3 913 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 LILRA6Q6PI73 481 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 GPR155Q7Z3F1 870 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 MAP4K3Q8IVH8 894 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 SMARCC2Q8TAQ2 1214 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 CCDC136Q96JN2 1154 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 HERC2P3Q9BVR0 1158 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 TRMT61BQ9BVS5 477 aaKnown RBP9.2□□□□□ -0.94
NCSTN-206ENST00000435149 IL17BQ9UHF5 180 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 DNMT3LQ9UJW3 386 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 F5P12259 2224 aa9.2□□□□□ -0.94
NCSTN-206ENST00000435149 CACNA1EQ15878 2313 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 SPTAN1Q13813 2472 aaKnown RBP9.19□□□□□ -0.94
NCSTN-206ENST00000435149 DCLK1O15075 740 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 PLEKHA8P1O95397 391 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 GLUD2P49448 558 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 MLLT6P55198 1093 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-206ENST00000435149 RNASELQ05823 741 aaKnown RBP9.19□□□□□ -0.94
NCSTN-206ENST00000435149 KRT32Q14532 448 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 KARSQ15046 597 aaKnown RBP9.19□□□□□ -0.94
NCSTN-206ENST00000435149 KIZQ2M2Z5 673 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 C4orf17Q53FE4 359 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 TAF1BQ53T94 588 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-206ENST00000435149 C1orf228Q6PIY5 440 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 NUDT18Q6ZVK8 323 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 TAS1R1Q7RTX1 841 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 SGMS1Q86VZ5 419 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 SKAP1Q86WV1 359 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 MICU3Q86XE3 530 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 KIAA0319LQ8IZA0 1049 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 PNPLA1Q8N8W4 532 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 FANCBQ8NB91 859 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 GIMAP8Q8ND71 665 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-206ENST00000435149 ING5Q8WYH8 240 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 MSANTD3Q96H12 275 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 PPP1R16BQ96T49 567 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 ARID3AQ99856 593 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 GBP3Q9H0R5 595 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 RTEL1Q9NZ71 1219 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 GDE1Q9NZC3 331 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 EVLQ9UI08 416 aaPredicted RBP9.19□□□□□ -0.94
NCSTN-206ENST00000435149 KCNH3Q9ULD8 1083 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 MTCL1Q9Y4B5 1905 aaKnown RBP9.19□□□□□ -0.94
NCSTN-206ENST00000435149 DOCK6Q96HP0 2047 aa9.19□□□□□ -0.94
NCSTN-206ENST00000435149 UBR5O95071 2799 aaPredicted RBP9.18□□□□□ -0.94
NCSTN-206ENST00000435149 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 B4GALT3O60512 393 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 HMGB1P09429 215 aaKnown RBP9.18□□□□□ -0.94
NCSTN-206ENST00000435149 HNRNPA1P09651 372 aaKnown RBP eCLIP9.18□□□□□ -0.94
NCSTN-206ENST00000435149 FTH1P19P0C7X4 201 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 RXRAP19793 462 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 TSC2P49815 1807 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 FRMPD4Q14CM0 1322 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 TRIP6Q15654 476 aaKnown RBP9.18□□□□□ -0.94
NCSTN-206ENST00000435149 TSGA10IPQ3SY00 556 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 TRIM61Q5EBN2 209 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 NOMO2Q5JPE7 1267 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 USP17L6PQ6QN14 398 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 TMTC3Q6ZXV5 915 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 SYNPOQ8N3V7 929 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 HDDC3Q8N4P3 179 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 SRBD1Q8N5C6 995 aaKnown RBP9.18□□□□□ -0.94
NCSTN-206ENST00000435149 MCRS1Q96EZ8 462 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 NUSAP1Q9BXS6 441 aaKnown RBP9.18□□□□□ -0.94
NCSTN-206ENST00000435149 LRRC2Q9BYS8 371 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 IRX2Q9BZI1 471 aaPredicted RBP9.18□□□□□ -0.94
NCSTN-206ENST00000435149 PSTPIP2Q9H939 334 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 RBM28Q9NW13 759 aaKnown RBP9.18□□□□□ -0.94
NCSTN-206ENST00000435149 POLIQ9UNA4 740 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 PAXBP1Q9Y5B6 917 aa9.18□□□□□ -0.94
NCSTN-206ENST00000435149 FBN2P35556 2912 aa9.17□□□□□ -0.94
NCSTN-206ENST00000435149 TRABD2BA6NFA1 517 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms