RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RDH13Q8NBN7 331 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 IWS1Q96ST2 819 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 BTBD10Q9BSF8 475 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 GRID1Q9ULK0 1009 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 CDH16O75309 829 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 USP17L8P0C7I0 530 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 CDK7P50613 346 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 PKN2Q16513 984 aaKnown RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 RASSF3Q86WH2 238 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 SLC44A5Q8NCS7 719 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 C10orf82Q8WW14 230 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 LENG1Q96BZ8 264 aaPredicted RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 CCDC77Q9BR77 488 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 TRABDQ9H4I3 376 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 TAS2R1Q9NYW7 299 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ANAPC5Q9UJX4 755 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 STARD13Q9Y3M8 1113 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 COMMD3-BMI1R4GMX3 469 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 C5P01031 1676 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 EXOC1LA0A1B0GW35 172 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 KLRF2D3W0D1 207 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 BOLA2-SMG1P6H3BVE0 249 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 EDF1O60869 148 aaKnown RBP7.93□□□□□ -1.14
CPSF6-202ENST00000435070 EYA4O95677 639 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ASLP04424 464 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 MOGSQ13724 837 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 CMPK2Q5EBM0 449 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 SESTD1Q86VW0 696 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 CCDC65Q8IXS2 484 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 AZIN2Q96A70 460 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 DNAJC19Q96DA6 116 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ZC4H2Q9NQZ6 224 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 HSFX1Q9UBD0 423 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
CPSF6-202ENST00000435070 ECE2O60344 883 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 AKAP3O75969 853 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 GYS1P13807 737 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 ATP6V1B1P15313 513 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 PPATQ06203 517 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 SGO2Q562F6 1265 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 DUS1LQ6P1R4 473 aaKnown RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 USP17L2Q6R6M4 530 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 KRT25Q7Z3Z0 450 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 NLRP10Q86W26 655 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 BARHL2Q9NY43 387 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 STX18Q9P2W9 335 aaKnown RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 FGFR1P11362 822 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 ADARP55265 1226 aaKnown RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 TMEM63BQ5T3F8 832 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 ANKRD23Q86SG2 305 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 SYT2Q8N9I0 419 aaPredicted RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 COA7Q96BR5 231 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 THTPAQ9BU02 230 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 HEMGNQ9BXL5 484 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 DNAJC12Q9UKB3 198 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 MYH3P11055 1940 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 A0A0J9YVX5 310 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 H3BRJ5 948 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 M0R2N6 131 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 MEIS1O00470 390 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 TPD52L2O43399 206 aaKnown RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 GRIA2P42262 883 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 DSG1Q02413 1049 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 R3HDM1Q15032 1099 aaKnown RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 FYB2Q5VWT5 728 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 LVRNQ6Q4G3 990 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 RNF207Q6ZRF8 634 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 ZNF444Q8N0Y2 327 aaPredicted RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 C6orf50Q9HD87 102 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 CHST7Q9NS84 486 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 NDE1Q9NXR1 346 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 AKAP11Q9UKA4 1901 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 SPEF2Q9C093 1822 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 SFI1A8K8P3 1242 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 B2RBV5 119 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 FTLP02792 175 aaPredicted RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 GJC1P36383 396 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 KDSRQ06136 332 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 CCDC62Q6P9F0 684 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 SLC20A1Q8WUM9 679 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 SIKE1Q9BRV8 207 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 MAF1Q9H063 256 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 ZNF287Q9HBT7 754 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 ACP6Q9NPH0 428 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 TTC7AQ9ULT0 858 aaPredicted RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 SYNGAP1Q96PV0 1343 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 A0A1W2PPM1 405 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 POTEB3A0JP26 581 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 PABPN1LA6NDY0 278 aaKnown RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 POTECB2RU33 542 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 ASMTLO95671 621 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 KCNA1Q09470 495 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 SH2D4BQ5SQS7 431 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 POTEBQ6S5H4 581 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 TRIM67Q6ZTA4 783 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 REXO1Q8N1G1 1221 aaKnown RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 TAB3Q8N5C8 712 aaPredicted RBP7.92□□□□□ -1.14
CPSF6-202ENST00000435070 FBXO27Q8NI29 283 aa7.92□□□□□ -1.14
CPSF6-202ENST00000435070 NSL1Q96IY1 281 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms