RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 NFATC3Q12968 1075 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 NOGQ13253 232 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 BLMHQ13867 455 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 PAQR3Q6TCH7 311 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 LRSAM1Q6UWE0 723 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 RHOT1Q8IXI2 618 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 OR2I1PQ8NGU4 316 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 BRI3BPQ8WY22 251 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 ANKS1AQ92625 1134 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 TOE1Q96GM8 510 aaKnown RBP8.62□□□□□ -1.03
PTPRK-212ENST00000434424 ZC3H10Q96K80 434 aaKnown RBP8.62□□□□□ -1.03
PTPRK-212ENST00000434424 FAM167AQ96KS9 214 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 C14orf93Q9H972 538 aaKnown RBP8.62□□□□□ -1.03
PTPRK-212ENST00000434424 PNPLA8Q9NP80 782 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 LMBRD1Q9NUN5 540 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 SAGE1Q9NXZ1 904 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 KCMF1Q9P0J7 381 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 STAP2Q9UGK3 403 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 PCDHGB2Q9Y5G2 931 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 ARHGAP5Q13017 1502 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 STRCQ7RTU9 1775 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 PLA2R1Q13018 1463 aa8.62□□□□□ -1.03
PTPRK-212ENST00000434424 AGLP35573 1532 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 DDX3XO00571 662 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTPRK-212ENST00000434424 ADAMTS3O15072 1205 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 ARIH2O95376 493 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 LRG1P02750 347 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 SRGNP10124 158 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 NKX6-1P78426 367 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-212ENST00000434424 PUM3Q15397 648 aaKnown RBP8.61□□□□□ -1.03
PTPRK-212ENST00000434424 PGBD2Q6P3X8 592 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 SYTL1Q8IYJ3 562 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 CLASRPQ8N2M8 674 aaKnown RBP8.61□□□□□ -1.03
PTPRK-212ENST00000434424 CCDC33Q8N5R6 958 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 GPR156Q8NFN8 814 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 IL31RAQ8NI17 732 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 GCC1Q96CN9 775 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 SLC35A4Q96G79 324 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 MPP4Q96JB8 637 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 TBATAQ96M53 351 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 DIRC2Q96SL1 478 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 UNKQ9C0B0 810 aaKnown RBP8.61□□□□□ -1.03
PTPRK-212ENST00000434424 HSPBP1Q9NZL4 362 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 MAGED2Q9UNF1 606 aaPredicted RBP8.61□□□□□ -1.03
PTPRK-212ENST00000434424 MLH3Q9UHC1 1453 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 SAMD9Q5K651 1589 aa8.61□□□□□ -1.03
PTPRK-212ENST00000434424 LRRC14BA6NHZ5 514 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 PSPNO60542 156 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 CUTAO60888 179 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 IL18RAPO95256 599 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 ZSCAN22P10073 491 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-212ENST00000434424 PNLIPP16233 465 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 MAPK9P45984 424 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 STARD3Q14849 445 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 JAKMIP3Q5VZ66 844 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 HIBCHQ6NVY1 386 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-212ENST00000434424 LVRNQ6Q4G3 990 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 BMP8AQ7Z5Y6 402 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 SIAH1Q8IUQ4 282 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 LIX1LQ8IVB5 337 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 ZSCAN18Q8TBC5 510 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-212ENST00000434424 TMEM41AQ96HV5 264 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 CLPTM1LQ96KA5 538 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 NSUN3Q9H649 340 aaKnown RBP8.6□□□□□ -1.03
PTPRK-212ENST00000434424 TNFRSF12AQ9NP84 129 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 PCDHA3Q9Y5H8 950 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 SCINQ9Y6U3 715 aa8.6□□□□□ -1.03
PTPRK-212ENST00000434424 CPS1P31327 1500 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 ZNF839A8K0R7 811 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 ISM1B1AKI9 464 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 FGF18O76093 207 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 TSHRP16473 764 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 SLC7A1P30825 629 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 CDC42EP1Q00587 391 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 MGAT5Q09328 741 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 DAG1Q14118 895 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 PLS1Q14651 629 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 CNGA2Q16280 664 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 GJC2Q5T442 439 aaPredicted RBP8.59□□□□□ -1.03
PTPRK-212ENST00000434424 HEATR3Q7Z4Q2 680 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 NLRX1Q86UT6 975 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 FAM126BQ8IXS8 530 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 FBXO15Q8NCQ5 510 aaPredicted RBP8.59□□□□□ -1.03
PTPRK-212ENST00000434424 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.59□□□□□ -1.03
PTPRK-212ENST00000434424 IGDCC4Q8TDY8 1250 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 BTBD2Q9BX70 525 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 EPB41L4AQ9HCS5 686 aaPredicted RBP8.59□□□□□ -1.03
PTPRK-212ENST00000434424 TDP1Q9NUW8 608 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 PNPOQ9NVS9 261 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.59□□□□□ -1.03
PTPRK-212ENST00000434424 GPR160Q9UJ42 338 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 GPR52Q9Y2T5 361 aa8.59□□□□□ -1.03
PTPRK-212ENST00000434424 USP19O94966 1318 aa8.58□□□□□ -1.04
PTPRK-212ENST00000434424 REREQ9P2R6 1566 aa8.58□□□□□ -1.04
PTPRK-212ENST00000434424 FMN1Q68DA7 1419 aa8.58□□□□□ -1.04
PTPRK-212ENST00000434424 APOL1O14791 398 aa8.58□□□□□ -1.04
PTPRK-212ENST00000434424 SEC24DO94855 1032 aaPredicted RBP8.58□□□□□ -1.04
PTPRK-212ENST00000434424 EFEMP2O95967 443 aa8.58□□□□□ -1.04
PTPRK-212ENST00000434424 HSP90AA1P07900 732 aaKnown RBP8.58□□□□□ -1.04
PTPRK-212ENST00000434424 PARP1P09874 1014 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms