RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 URGCPQ8TCY9 931 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 CCDC127Q96BQ5 260 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 SNX27Q96L92 541 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 TSPY26PQ9H489 355 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 UBN1Q9NPG3 1134 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 PTPRSQ13332 1948 aa16.68■□□□□ 0.26
CNOT9-205ENST00000433439 TLL1O43897 1013 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 DGKIO75912 1065 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 GJB5O95377 273 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 FGFR1OPO95684 399 aaKnown RBP16.67■□□□□ 0.26
CNOT9-205ENST00000433439 EPB41P11171 864 aaKnown RBP16.67■□□□□ 0.26
CNOT9-205ENST00000433439 PSMC2P35998 433 aaKnown RBP16.67■□□□□ 0.26
CNOT9-205ENST00000433439 ZNF165P49910 485 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 RNASELQ05823 741 aaKnown RBP16.67■□□□□ 0.26
CNOT9-205ENST00000433439 MYBPC2Q14324 1141 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
CNOT9-205ENST00000433439 NOMO2Q5JPE7 1267 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 CT47A1Q5JQC4 288 aaPredicted RBP16.67■□□□□ 0.26
CNOT9-205ENST00000433439 LRSAM1Q6UWE0 723 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 LRRC55Q6ZSA7 311 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 BRSK2Q8IWQ3 736 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 AOPEPQ8N6M6 819 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 PHOSPHO2Q8TCD6 241 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 TMEM117Q9H0C3 514 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 PDE11AQ9HCR9 933 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 MIOSQ9NXC5 875 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 CEP290O15078 2479 aa16.67■□□□□ 0.26
CNOT9-205ENST00000433439 CITO14578 2027 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 MEFVO15553 781 aaPredicted RBP16.66■□□□□ 0.26
CNOT9-205ENST00000433439 DLATP10515 647 aaKnown RBP16.66■□□□□ 0.26
CNOT9-205ENST00000433439 KRT13P13646 458 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 WNT7BP56706 349 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 CYP24A1Q07973 514 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 BTG3Q14201 252 aaPredicted RBP16.66■□□□□ 0.26
CNOT9-205ENST00000433439 SPOUT1Q5T280 376 aaKnown RBP16.66■□□□□ 0.26
CNOT9-205ENST00000433439 SPATA1Q5VX52 437 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 LMBRD2Q68DH5 695 aaPredicted RBP16.66■□□□□ 0.26
CNOT9-205ENST00000433439 JADE1Q6IE81 842 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 CRIPAKQ8N1N5 446 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 KIF12Q96FN5 646 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 FBXL18Q96ME1 805 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 CEP63Q96MT8 703 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 CASD1Q96PB1 797 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 FNBP1Q96RU3 617 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 NFE2L3Q9Y4A8 694 aa16.66■□□□□ 0.26
CNOT9-205ENST00000433439 TTC26A0AVF1 554 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 BECN2A8MW95 431 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 PTGESO14684 152 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 IL18RAPO95256 599 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 NFICP08651 508 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 MYOGP15173 224 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 TFAMQ00059 246 aaKnown RBP16.65■□□□□ 0.26
CNOT9-205ENST00000433439 MYL5Q02045 173 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 FILIP1Q7Z7B0 1213 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
CNOT9-205ENST00000433439 FAM84AQ96KN4 292 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 FAM193BQ96PV7 902 aaPredicted RBP16.65■□□□□ 0.26
CNOT9-205ENST00000433439 POP1Q99575 1024 aaKnown RBP16.65■□□□□ 0.26
CNOT9-205ENST00000433439 MMRN2Q9H8L6 949 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 PLEKHA5Q9HAU0 1116 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 TBC1D13Q9NVG8 400 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 MAGEC2Q9UBF1 373 aaPredicted RBP16.65■□□□□ 0.26
CNOT9-205ENST00000433439 HCSTQ9UBK5 93 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 PLAGL2Q9UPG8 496 aa16.65■□□□□ 0.26
CNOT9-205ENST00000433439 TRIP11Q15643 1979 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 SZT2Q5T011 3432 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.64■□□□□ 0.25
CNOT9-205ENST00000433439 SMIM28A0A1B0GU29 152 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.64■□□□□ 0.25
CNOT9-205ENST00000433439 THP07101 528 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 TNNI1P19237 187 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 VAMP7P51809 220 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 ZNF445P59923 1031 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 TMEM132DQ14C87 1099 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 SURF1Q15526 300 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
CNOT9-205ENST00000433439 TCERG1LQ5VWI1 586 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 FOXR2Q6PJQ5 311 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 ALKAL1Q6UXT8 129 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 CD302Q8IX05 232 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 ZC3H3Q8IXZ2 948 aaKnown RBP16.64■□□□□ 0.25
CNOT9-205ENST00000433439 TMEM130Q8N3G9 435 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 GSTCDQ8NEC7 633 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 MFSD14AQ96MC6 490 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 ZMAT2Q96NC0 199 aaKnown RBP16.64■□□□□ 0.25
CNOT9-205ENST00000433439 RAD9AQ99638 391 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 MKNK1Q9BUB5 465 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 MRPL9Q9BYD2 267 aaKnown RBP16.64■□□□□ 0.25
CNOT9-205ENST00000433439 ASB7Q9H672 318 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 CBX8Q9HC52 389 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 SAMSN1Q9NSI8 373 aaKnown RBP16.64■□□□□ 0.25
CNOT9-205ENST00000433439 CNTN3Q9P232 1028 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 KANSL3Q9P2N6 904 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
CNOT9-205ENST00000433439 INSL6Q9Y581 213 aa16.64■□□□□ 0.25
CNOT9-205ENST00000433439 FNDC1Q4ZHG4 1894 aaPredicted RBP16.63■□□□□ 0.25
CNOT9-205ENST00000433439 LCHNA4D1U4 455 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 SMTNL1A8MU46 457 aa16.63■□□□□ 0.25
CNOT9-205ENST00000433439 SLC16A3O15427 465 aaKnown RBP16.63■□□□□ 0.25
CNOT9-205ENST00000433439 TRIM49P0CI25 452 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms