RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TCEANC2Q96MN5 208 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MYCBPQ99417 103 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 NTPCRQ9BSD7 190 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 ASNSD1Q9NWL6 643 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 KIF3CO14782 793 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PPP1R37O75864 691 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 KIAA0408Q6ZU52 694 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 KATNAL2Q8IYT4 538 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 INPP4AQ96PE3 977 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 CLIC4Q9Y696 253 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ZDBF2Q9HCK1 2354 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 A0A1W2PRG0 241 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 HMGCRP04035 888 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 PCK1P35558 622 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 CREMQ03060 361 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 EPS8Q12929 822 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 IER5Q5VY09 327 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 LRRC34Q8IZ02 419 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 NSMCE1Q8WV22 266 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 TSPAN17Q96FV3 270 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 MTMR12Q9C0I1 747 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 CENPHQ9H3R5 247 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 VPS37BQ9H9H4 285 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 TAB2Q9NYJ8 693 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 DRG1Q9Y295 367 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 CSDE1O75534 798 aaKnown RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 POLGP54098 1239 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 ATP2B2Q01814 1243 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 EHHADHQ08426 723 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 TMEM132AQ24JP5 1023 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 ILDR1Q86SU0 546 aaPredicted RBP4□□□□□ -1.77
SHPRH-205ENST00000433355 CCDC13Q8IYE1 715 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 USP6NLQ92738 828 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 CHMP6Q96FZ7 201 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 HSD17B14Q9BPX1 270 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 APC2O95996 2303 aa4□□□□□ -1.77
SHPRH-205ENST00000433355 KANSL1LA0AUZ9 987 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L15C9J2P7 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L13C9JLJ4 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L11C9JVI0 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L18D6R9N7 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L22D6RA61 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L17D6RBQ6 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L19D6RCP7 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L20D6RJB6 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 LRRN2O75325 713 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 GSCP56915 257 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 USP17L24Q0WX57 530 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 NR5A1Q13285 461 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 LAMC2Q13753 1193 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 DUOXA2Q1HG44 320 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PPP1R15BQ5SWA1 713 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF594Q96JF6 807 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SHCBP1LQ9BZQ2 653 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SMARCAD1Q9H4L7 1026 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ASIC3Q9UHC3 531 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 L1RE1Q9UN81 338 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 LRRC53A6NM62 1247 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 F8VZ95 297 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SLCO1B7G3V0H7 640 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 GNRH1P01148 92 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TTKP33981 857 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SLC14A2Q15849 920 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 DNAL1Q4LDG9 190 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 INTS6LQ5JSJ4 861 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ANKRD20A3Q5VUR7 823 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 LBX2Q6XYB7 198 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SESTD1Q86VW0 696 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 WDR49Q8IV35 697 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 MPP5Q8N3R9 675 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 LZTR1Q8N653 840 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TRMOQ9BU70 441 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 STARD13Q9Y3M8 1113 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 CDY2AQ9Y6F7 541 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 CDY1Q9Y6F8 540 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 HACD1B0YJ81 288 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 CABYRO75952 493 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 FDFT1P37268 417 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 HIRAP54198 1017 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 GEMIN4P57678 1058 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 DHX9Q08211 1270 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 KCNH2Q12809 1159 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ZC3H12AQ5D1E8 599 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 LSM14BQ9BX40 385 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 TMEM134Q9H6X4 195 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ERAP1Q9NZ08 941 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 MACROD2A1Z1Q3 448 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PPFIA2O75334 1257 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 RXRGP48443 463 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 AMPD2Q01433 879 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 CDR2Q01850 454 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF667Q5HYK9 610 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SLC30A5Q8TAD4 765 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 STK32AQ8WU08 396 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 MCUR1Q96AQ8 359 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 SEPT11Q9NVA2 429 aaKnown RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 PSMC3IPQ9P2W1 217 aaPredicted RBP3.99□□□□□ -1.77
SHPRH-205ENST00000433355 COQ4Q9Y3A0 265 aa3.99□□□□□ -1.77
SHPRH-205ENST00000433355 ZRANB2O95218 330 aaKnown RBP eCLIP3.99□□□□□ -1.777e-6■■■■■ 37.3
SHPRH-205ENST00000433355 MLNP12872 115 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms