RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 UBAP1LF5GYI3 381 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 BCRP11274 1271 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 SNAP25P60880 206 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 ZRSR2Q15696 482 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 CERKLQ49MI3 558 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 ZFYVE27Q5T4F4 411 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 C4orf50Q6ZRC1 276 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 ZNF365Q70YC5 407 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 NRG4Q8WWG1 115 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 SLC5A5Q92911 643 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 KAT5Q92993 513 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 TRABDQ9H4I3 376 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.3□□□□□ -0.444e-6■■■□□ 15.1
HMGCS1-202ENST00000433297 WHRNQ9P202 907 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 USP20Q9Y2K6 914 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 ZBTB39O15060 712 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 TP73O15350 636 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 SGPL1O95470 568 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 GGPS1O95749 300 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 GAS8O95995 478 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 KCNQ4P56696 695 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 PKN2Q16513 984 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 HYIQ5T013 277 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 DAB2IPQ5VWQ8 1189 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 TRMT1LQ7Z2T5 733 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 ENDOVQ8N8Q3 282 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 SYT2Q8N9I0 419 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 MAIP1Q8WWC4 291 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 DYDC2Q96IM9 177 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 SMC6Q96SB8 1091 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 COL4A1P02462 1669 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 SLC16A3O15427 465 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 ETS2P15036 469 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 GSTT1P30711 240 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 C11orf63Q6NUN7 778 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 DPP8Q6V1X1 898 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 LRRC74BQ6ZQY2 392 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 TPH2Q8IWU9 490 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 MIPEPQ99797 713 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 VPS37BQ9H9H4 285 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 GRID1Q9ULK0 1009 aa12.3□□□□□ -0.44
HMGCS1-202ENST00000433297 LMNAP02545 664 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 CPA2P48052 419 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 ACSBG2Q5FVE4 666 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 TMEM63BQ5T3F8 832 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 RBM41Q96IZ5 413 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 PCDHB18PQ96TA0 734 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 CADM1Q9BY67 442 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 UBE2OQ9C0C9 1292 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 C12orf65Q9H3J6 166 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 SAYSD1Q9NPB0 183 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 GTPBP10A4D1E9 387 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 ABLIM1O14639 778 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 MAP3K7O43318 606 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 TBX10O75333 385 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 ASMTLO95671 621 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 EYA4O95677 639 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 RRM1P23921 792 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 GCLMP48507 274 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 SIX1Q15475 284 aaPredicted RBP12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 SLC1A5Q15758 541 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 FYB2Q5VWT5 728 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 ARHGEF19Q8IW93 802 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 PDCD7Q8N8D1 485 aaKnown RBP12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 FAM136AQ96C01 138 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.442e-7■■■■□ 24.7
HMGCS1-202ENST00000433297 CYTH2Q99418 400 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 TRAIPQ9BWF2 469 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 RABGAP1Q9Y3P9 1069 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 NUP98P52948 1817 aa12.29□□□□□ -0.44
HMGCS1-202ENST00000433297 GOLGA8RI6L899 631 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 BAG2O95816 211 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 CETN2P41208 172 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 PIK3CAP42336 1068 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 DLG4P78352 724 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 MTM1Q13496 603 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 C2CD6Q53TS8 623 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 IZUMO3Q5VZ72 239 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 C16orf86Q6ZW13 317 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 OTOAQ7RTW8 1153 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 BTG4Q9NY30 223 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 PCDHA1Q9Y5I3 950 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 CYP26A1O43174 497 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 EDF1O60869 148 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 SPATA31C1P0DKV0 1188 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 ZNF76P36508 570 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 MOGSQ13724 837 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 THOC5Q13769 683 aaKnown RBP12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 LVRNQ6Q4G3 990 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 PPM1KQ8N3J5 372 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 ZFAND2BQ8WV99 257 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 C7orf43Q8WVR3 580 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 ITFG2Q969R8 447 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 SYT11Q9BT88 431 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 PLVAPQ9BX97 442 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 ANO3Q9BYT9 981 aa12.28□□□□□ -0.44
HMGCS1-202ENST00000433297 LRRC19Q9H756 370 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms