RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TMX3Q96JJ7 454 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 MYD88Q99836 296 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 VRK1Q99986 396 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 TMEM168Q9H0V1 697 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 ADAM7Q9H2U9 754 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 MSL2Q9HCI7 577 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 SIDT1Q9NXL6 827 aaKnown RBP3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 KCTD3Q9Y597 815 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 PCDHA3Q9Y5H8 950 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 SLC4A7Q9Y6M7 1214 aa3.95□□□□□ -1.78
HMGB1P27-201ENST00000431429 CFAP69A5D8W1 941 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 ISM1B1AKI9 464 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 FOXN3O00409 490 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 NRP1O14786 923 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 ARHGAP6O43182 974 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 TSPAN15O95858 294 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 MYL3P08590 195 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 EN2P19622 333 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 PRIM2P49643 509 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 FLT3LGP49771 235 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 DUSP8Q13202 625 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 SAFB2Q14151 953 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 RNF151Q2KHN1 245 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 C4orf46Q504U0 113 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 FAM47AQ5JRC9 791 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 DGKKQ5KSL6 1271 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 MFSD14BQ5SR56 506 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 SYDE1Q6ZW31 735 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 SRLQ86TD4 932 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 PPP1R3BQ86XI6 285 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 FAM186BQ8IYM0 893 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 OR2C3Q8N628 320 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 LINC01356Q8N9X3 169 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 CCHCR1Q8TD31 782 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 CEP95Q96GE4 821 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 BORCS6Q96GS4 357 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 FAM84AQ96KN4 292 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 COLEC11Q9BWP8 271 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 APOL5Q9BWW9 433 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 LRRC27Q9C0I9 530 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 MRPL46Q9H2W6 279 aaKnown RBP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 LDAHQ9H6V9 325 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 BARX1Q9HBU1 254 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 PTPRHQ9HD43 1115 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 PLCB1Q9NQ66 1216 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 RTEL1Q9NZ71 1219 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 ABCF2Q9UG63 623 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 SLC23A1Q9UHI7 598 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 AJAP1Q9UKB5 411 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 SMG5Q9UPR3 1016 aaKnown RBP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 DAAM1Q9Y4D1 1078 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 RBM8AQ9Y5S9 174 aaKnown RBP3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 USP19O94966 1318 aa3.94□□□□□ -1.78
HMGB1P27-201ENST00000431429 A0A1B0GTL3 188 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 TBX3O15119 743 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 MGEA5O60502 916 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 MATN4O95460 622 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 SETSIPP0DME0 302 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 IL2RBP14784 551 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 TSHRP16473 764 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 ALDH1A3P47895 512 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 RRADP55042 308 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 BPIFB4P59827 614 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 HTRA4P83105 476 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 ATP2C1P98194 919 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 DUSP2Q05923 314 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZNF543Q08ER8 600 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 IFIT5Q13325 482 aaKnown RBP3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 MRPL49Q13405 166 aaKnown RBP3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 FLYWCH1Q4VC44 716 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 ATG14Q6ZNE5 492 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 GPR155Q7Z3F1 870 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 SESTD1Q86VW0 696 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 CMTM4Q8IZR5 234 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 CELF5Q8N6W0 485 aaKnown RBP3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 ANKRD53Q8N9V6 530 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 IL17RDQ8NFM7 739 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 KBTBD7Q8WVZ9 684 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 GCDHQ92947 438 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 MTFMTQ96DP5 389 aaKnown RBP3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 TNIP3Q96KP6 325 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 TBCBQ99426 244 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 POLR3GLQ9BT43 218 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 TRIM54Q9BYV2 358 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 TMEM140Q9NV12 185 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 STAP2Q9UGK3 403 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 FEZ2Q9UHY8 353 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 PADI4Q9UM07 663 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 MED16Q9Y2X0 877 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 ACTL7AQ9Y615 435 aa3.93□□□□□ -1.78
HMGB1P27-201ENST00000431429 ZMYM3Q14202 1370 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 ABCC9O60706 1549 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 ADAMTS20P59510 1910 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 H3BUI4 141 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 PJA2O43164 708 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 TEX33O43247 280 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 B4GALT3O60512 393 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 CNOT4O95628 575 aaKnown RBP3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 SBK3P0C264 359 aa3.92□□□□□ -1.78
HMGB1P27-201ENST00000431429 C1QTNF9P0C862 333 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms