RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CNTNAP2Q9UHC6 1331 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 H3BRB1 525 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 FAM189A1O60320 539 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 VNN1O95497 513 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 VTNP04004 478 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 PIK3CAP42336 1068 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 ZACNQ401N2 412 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 FMNL3Q8IVF7 1028 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 GPR161Q8N6U8 529 aaKnown RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 EPS8L1Q8TE68 723 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 PARD6BQ9BYG5 372 aa17.98■□□□□ 0.47
USHBP1-203ENST00000431146 TUT1Q9H6E5 874 aaKnown RBP17.98■□□□□ 0.47
USHBP1-203ENST00000431146 MGAMO43451 1857 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 CLSTN1O94985 981 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 MMP3P08254 477 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 CLCN6P51797 869 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 OSTNP61366 133 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 IRX5P78411 483 aaPredicted RBP17.97■□□□□ 0.47
USHBP1-203ENST00000431146 TFDP1Q14186 410 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 CCL14Q16627 93 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 TMEM132AQ24JP5 1023 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 ZNF484Q5JVG2 852 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 CREG2Q8IUH2 290 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 C2orf40Q9H1Z8 148 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 ANKZF1Q9H8Y5 726 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 OSGEPQ9NPF4 335 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 AKT3Q9Y243 479 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 HYOU1Q9Y4L1 999 aa17.97■□□□□ 0.47
USHBP1-203ENST00000431146 BTNL10A8MVZ5 291 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 ABLIM1O14639 778 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 PPFIA4O75335 1185 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 MBTD1Q05BQ5 628 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 MORN1Q5T089 497 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 CGRRF1Q99675 332 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 C1orf112Q9NSG2 853 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 NOCTQ9UK39 431 aaKnown RBP17.96■□□□□ 0.47
USHBP1-203ENST00000431146 A0A087WZ62 844 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 MANSC4A6NHS7 340 aaPredicted RBP17.96■□□□□ 0.47
USHBP1-203ENST00000431146 MMEP08473 750 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 KRT5P13647 590 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 CHRNB2P17787 502 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 PTENP60484 403 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 EEF1DP3Q658K8 133 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 RGMBQ6NW40 437 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 THNSL1Q8IYQ7 743 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 CEP120Q8N960 986 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 ARHGEF26Q96DR7 871 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 PCDHB18PQ96TA0 734 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 FDXACB1Q9BRP7 624 aaPredicted RBP17.96■□□□□ 0.47
USHBP1-203ENST00000431146 THAP2Q9H0W7 228 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 IFT122Q9HBG6 1241 aa17.96■□□□□ 0.47
USHBP1-203ENST00000431146 DYNC1LI2O43237 492 aaPredicted RBP17.95■□□□□ 0.46
USHBP1-203ENST00000431146 CYP2C19P33261 490 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 TNFAIP2Q03169 654 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 ENPEPQ07075 957 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 MAP2K5Q13163 448 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 MEI1Q5TIA1 1274 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 ATF7IP2Q5U623 682 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 TPCN2Q8NHX9 752 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 VTI1AQ96AJ9 217 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 MS4A14Q96JA4 679 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 PNKPQ96T60 521 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 FZD8Q9H461 694 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 ZNF446Q9NWS9 450 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 ACKR2O00590 384 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 OGTO15294 1046 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 CYP2B6P20813 491 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 MCL1Q07820 350 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 DMTNQ08495 405 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 C2orf54Q08AI8 447 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 ZNF568Q3ZCX4 644 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 IQSEC1Q6DN90 963 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 MTHFD1LQ6UB35 978 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 IFNL1Q8IU54 200 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 BRSK2Q8IWQ3 736 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 SLC35G2Q8TBE7 412 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 APOBEC3GQ9HC16 384 aaKnown RBP17.95■□□□□ 0.46
USHBP1-203ENST00000431146 CHORDC1Q9UHD1 332 aaPredicted RBP17.95■□□□□ 0.46
USHBP1-203ENST00000431146 INTUQ9ULD6 942 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 ZNF236Q9UL36 1845 aa17.95■□□□□ 0.46
USHBP1-203ENST00000431146 CYP11B1P15538 503 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 TCP1P17987 556 aaKnown RBP17.94■□□□□ 0.46
USHBP1-203ENST00000431146 CKAP4Q07065 602 aaKnown RBP17.94■□□□□ 0.46
USHBP1-203ENST00000431146 PPFIA1Q13136 1202 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 DGKDQ16760 1214 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 WDR44Q5JSH3 913 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 MPZL3Q6UWV2 235 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 TSHZ1Q6ZSZ6 1077 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 TMEM192Q8IY95 271 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 LINC01465Q8N7H1 131 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 LRRC57Q8N9N7 239 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 CTNNBL1Q8WYA6 563 aaPredicted RBP17.94■□□□□ 0.46
USHBP1-203ENST00000431146 SLC5A4Q9NY91 659 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 UMODL1Q5DID0 1318 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 ZSWIM8A7E2V4 1837 aa17.94■□□□□ 0.46
USHBP1-203ENST00000431146 ASAP2O43150 1006 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 PHACTR2O75167 634 aa17.93■□□□□ 0.46
USHBP1-203ENST00000431146 SEC31AO94979 1220 aaKnown RBP17.93■□□□□ 0.46
USHBP1-203ENST00000431146 FTLP02792 175 aaPredicted RBP17.93■□□□□ 0.46
USHBP1-203ENST00000431146 PRLRP16471 622 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms