RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 PDILTQ8N807 584 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 SYT2Q8N9I0 419 aaPredicted RBP18.6■□□□□ 0.57
UBE3D-204ENST00000430071 ZBTB45Q96K62 511 aaPredicted RBP18.6■□□□□ 0.57
UBE3D-204ENST00000430071 RPS6KC1Q96S38 1066 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 NOTCH4Q99466 2003 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 ACO2Q99798 780 aaKnown RBP18.6■□□□□ 0.57
UBE3D-204ENST00000430071 TARS2Q9BW92 718 aaKnown RBP18.6■□□□□ 0.57
UBE3D-204ENST00000430071 ADAM7Q9H2U9 754 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 ARHGAP28Q9P2N2 729 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 CCDC39Q9UFE4 941 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 TCHHQ07283 1943 aa18.6■□□□□ 0.57
UBE3D-204ENST00000430071 CARNS1A5YM72 827 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 TEX28O15482 410 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 PLA2G4BP0C869 781 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 CMA1P23946 247 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 EFNA5P52803 228 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 BMS1Q14692 1282 aaKnown RBP18.59■□□□□ 0.57
UBE3D-204ENST00000430071 TPRNQ4KMQ1 711 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 RRAGBQ5VZM2 374 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 TMC5Q6UXY8 1006 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 GLYCTKQ8IVS8 523 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 TMEM87AQ8NBN3 555 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 RAD54LQ92698 747 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 CDT1Q9H211 546 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 KMT5AQ9NQR1 393 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 MRPL17Q9NRX2 175 aaKnown RBP18.59■□□□□ 0.57
UBE3D-204ENST00000430071 CHST7Q9NS84 486 aa18.59■□□□□ 0.57
UBE3D-204ENST00000430071 ABLIM1O14639 778 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 MEFVO15553 781 aaPredicted RBP18.58■□□□□ 0.57
UBE3D-204ENST00000430071 URODP06132 367 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 SPATA31D3P0C874 917 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 RPL17P18621 184 aaKnown RBP18.58■□□□□ 0.57
UBE3D-204ENST00000430071 GLUD2P49448 558 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 OSTNP61366 133 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 DSG1Q02413 1049 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 GIT2Q14161 759 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 DHX8Q14562 1220 aaKnown RBP18.58■□□□□ 0.57
UBE3D-204ENST00000430071 MCM6Q14566 821 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 E2F4Q16254 413 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 CCDC73Q6ZRK6 1079 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 SPATA31D4Q6ZUB0 917 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 ZBTB33Q86T24 672 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 TMEM130Q8N3G9 435 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 FBXL18Q96ME1 805 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 ADPGKQ9BRR6 497 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 COLEC11Q9BWP8 271 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 PTPRHQ9HD43 1115 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 STK17AQ9UEE5 414 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 ADAM28Q9UKQ2 775 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 TNFSF13BQ9Y275 285 aa18.58■□□□□ 0.57
UBE3D-204ENST00000430071 A0A1B0GVL5 298 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 A0A1W2PQ27 194 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 A0A1W2PQ64 194 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 A0A1W2PQD8 194 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 C2CD4DB7Z1M9 353 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 KIF4AO95239 1232 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 THP07101 528 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 PFKFB1P16118 471 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 GUCY2CP25092 1073 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 DMP1Q13316 513 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-204ENST00000430071 TUSC3Q13454 348 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 RTP2Q5QGT7 225 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 PRSS55Q6UWB4 352 aaPredicted RBP18.57■□□□□ 0.56
UBE3D-204ENST00000430071 CLEC17AQ6ZS10 378 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 LARP4BQ92615 738 aaKnown RBP18.57■□□□□ 0.56
UBE3D-204ENST00000430071 GOLPH3LQ9H4A5 285 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 TMEM134Q9H6X4 195 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 GOLGA2P5Q9HBQ8 144 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 RXFP1Q9HBX9 757 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 FAM13BQ9NYF5 915 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 HPSEQ9Y251 543 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 ZMYM2Q9UBW7 1377 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 KMT2EQ8IZD2 1858 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 PHLPP2Q6ZVD8 1323 aa18.57■□□□□ 0.56
UBE3D-204ENST00000430071 FAM237AA0A1B0GTK4 181 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 PRR33A8MZF0 331 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 POLR2DO15514 142 aaKnown RBP18.56■□□□□ 0.56
UBE3D-204ENST00000430071 STAT6P42226 847 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 ITIH3Q06033 890 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 HSP90AA2PQ14568 343 aaPredicted RBP18.56■□□□□ 0.56
UBE3D-204ENST00000430071 DCAF4L1Q3SXM0 396 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 SEZ6Q53EL9 994 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 CES5AQ6NT32 575 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 CD300LGQ6UXG3 332 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 HFE2Q6ZVN8 426 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 PALB2Q86YC2 1186 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 FSIP1Q8NA03 581 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 TMEM161BQ8NDZ6 487 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 RIN2Q8WYP3 895 aaPredicted RBP18.56■□□□□ 0.56
UBE3D-204ENST00000430071 DRC1Q96MC2 740 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 EMILIN2Q9BXX0 1053 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 HAPLN2Q9GZV7 340 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 KCNH3Q9ULD8 1083 aa18.56■□□□□ 0.56
UBE3D-204ENST00000430071 TADA2AO75478 443 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 SOX4Q06945 474 aaPredicted RBP18.55■□□□□ 0.56
UBE3D-204ENST00000430071 KIAA1841Q6NSI8 718 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 DHX58Q96C10 678 aa18.55■□□□□ 0.56
UBE3D-204ENST00000430071 PPP1R10Q96QC0 940 aaKnown RBP18.55■□□□□ 0.56
UBE3D-204ENST00000430071 NTPCRQ9BSD7 190 aaKnown RBP18.55■□□□□ 0.56
UBE3D-204ENST00000430071 MAN1C1Q9NR34 630 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms