RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CEP57Q86XR8 500 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 CCDC105Q8IYK2 499 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
MSH5-208ENST00000429846 HASPINQ8TF76 798 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 CLSTN3Q9BQT9 956 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 CACNG4Q9UBN1 327 aa16.4■□□□□ 0.22
MSH5-208ENST00000429846 ZFHX2Q9C0A1 2572 aaPredicted RBP16.4■□□□□ 0.22
MSH5-208ENST00000429846 USP34Q70CQ2 3546 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 LAD1O00515 517 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 NARSO43776 548 aaKnown RBP16.39■□□□□ 0.21
MSH5-208ENST00000429846 SEC24BO95487 1268 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 POU2F2P09086 479 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 MYBP10242 640 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 LIG1P18858 919 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 U2AF2P26368 475 aaKnown RBP eCLIP16.39■□□□□ 0.219e-9■■■■□ 22.4
MSH5-208ENST00000429846 EEF1DP3Q658K8 133 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 GET4Q7L5D6 327 aaPredicted RBP16.39■□□□□ 0.21
MSH5-208ENST00000429846 SLC44A3Q8N4M1 653 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 C4orf32Q8N8J7 132 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 IGSF22Q8N9C0 903 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 UROC1Q96N76 676 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 KIAA1024Q9UPX6 916 aa16.39■□□□□ 0.21
MSH5-208ENST00000429846 ANHXE9PGG2 379 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 K7ERI5 159 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 XYLBO75191 536 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 EDN1P05305 212 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 C8AP07357 584 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 CFHP08603 1231 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 ECM1Q16610 540 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 PPM1LQ5SGD2 360 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 RTL10Q7L3V2 364 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 SNX29Q8TEQ0 813 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 RSAD2Q8WXG1 361 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 PPP1R10Q96QC0 940 aaKnown RBP16.38■□□□□ 0.21
MSH5-208ENST00000429846 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
MSH5-208ENST00000429846 DDX19AQ9NUU7 478 aaKnown RBP16.38■□□□□ 0.21
MSH5-208ENST00000429846 TNFSF13BQ9Y275 285 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 GDAQ9Y2T3 454 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 CITO14578 2027 aa16.38■□□□□ 0.21
MSH5-208ENST00000429846 MYH15Q9Y2K3 1946 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 DOCK6Q96HP0 2047 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 B3GAT3O94766 335 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 FGFR3P22607 806 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 RFX1P22670 979 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 FSHRP23945 695 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 PRPHP41219 470 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 YARSP54577 528 aaKnown RBP16.37■□□□□ 0.21
MSH5-208ENST00000429846 DMP1Q13316 513 aaPredicted RBP16.37■□□□□ 0.21
MSH5-208ENST00000429846 HTR4Q13639 388 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 DRC1Q96MC2 740 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 TMEM134Q9H6X4 195 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 C17orf75Q9HAS0 396 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 SLC2A4RGQ9NR83 387 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 MTRRQ9UBK8 725 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 USP20Q9Y2K6 914 aa16.37■□□□□ 0.21
MSH5-208ENST00000429846 FAM186AA6NE01 2351 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 KRBA1A5PL33 1030 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 PRR23AA6NEV1 266 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 PI15O43692 258 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 GRM5P41594 1212 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 PTGDRQ13258 359 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 RAB33AQ14088 237 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 NBR1Q14596 966 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 ANGPT1Q15389 498 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 GLRA4Q5JXX5 417 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 NT5DC1Q5TFE4 455 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 KRT79Q5XKE5 535 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 PHLDB3Q6NSJ2 640 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 DCLRE1AQ6PJP8 1040 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 DTWD2Q8NBA8 298 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 CCDC94Q9BW85 323 aaPredicted RBP16.36■□□□□ 0.21
MSH5-208ENST00000429846 CXCL16Q9H2A7 254 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 SLC38A7Q9NVC3 462 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 ARHGAP28Q9P2N2 729 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 CDH7Q9ULB5 785 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 DNM3Q9UQ16 869 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 KIF3AQ9Y496 699 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 NUMBLQ9Y6R0 609 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 MYH11P35749 1972 aa16.36■□□□□ 0.21
MSH5-208ENST00000429846 RIF1Q5UIP0 2472 aaKnown RBP16.36■□□□□ 0.21
MSH5-208ENST00000429846 CCDC169A6NNP5 214 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 NPTX2P47972 431 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 CLCNKBP51801 687 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 UPP1Q16831 310 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 ZNF568Q3ZCX4 644 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 XKR4Q5GH76 650 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 ANKS3Q6ZW76 656 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 MTSS1LQ765P7 747 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 ASCL5Q7RTU5 278 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 GRASPQ7Z6J2 395 aaPredicted RBP16.35■□□□□ 0.21
MSH5-208ENST00000429846 KCTD17Q8N5Z5 321 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 SLC7A14Q8TBB6 771 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 GPR152Q8TDT2 470 aa16.35■□□□□ 0.21
MSH5-208ENST00000429846 NKD2Q969F2 451 aaPredicted RBP16.35■□□□□ 0.21
MSH5-208ENST00000429846 DDX27Q96GQ7 796 aaKnown RBP16.35■□□□□ 0.21
MSH5-208ENST00000429846 ACO2Q99798 780 aaKnown RBP16.35■□□□□ 0.21
MSH5-208ENST00000429846 TIPINQ9BVW5 301 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms