RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MAN1C1Q9NR34 630 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 SPTLC3Q9NUV7 552 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 ARHGAP26Q9UNA1 814 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 PIN4Q9Y237 131 aaKnown RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 STK36Q9NRP7 1315 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 A0A087WWV3 80 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 CHUKO15111 745 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 PSMD3O43242 534 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 HMOX2P30519 316 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 HMGCS2P54868 508 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 BCAR1P56945 870 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 TAP1Q03518 808 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 QRICH1Q2TAL8 776 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 HAUS6Q7Z4H7 955 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 DYDC2Q96IM9 177 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 C11orf70Q9BRQ4 267 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 HEMGNQ9BXL5 484 aa9.45□□□□□ -0.9
CTNND1-208ENST00000428599 OSBPL5Q9H0X9 879 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-208ENST00000428599 SRGAP2O75044 1071 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 ZMYND10O75800 440 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 GCLMP48507 274 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 C12orf60Q5U649 245 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 STYK1Q6J9G0 422 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 CHMP1BQ7LBR1 199 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 DEFB132Q7Z7B7 95 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 TMEM260Q9NX78 707 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 CEP72Q9P209 647 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 USP32Q8NFA0 1604 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 DCCP43146 1447 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 NCOA3Q9Y6Q9 1424 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 STXBP3O00186 592 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 ORC4O43929 436 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 GRIN3BO60391 1043 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 ALDH1A2O94788 518 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 RPSAP08865 295 aaKnown RBP9.44□□□□□ -0.9
CTNND1-208ENST00000428599 LCP1P13796 627 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 SFR1Q86XK3 245 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 RNF135Q8IUD6 432 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 NEDD1Q8NHV4 660 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 PARK7Q99497 189 aaKnown RBP9.44□□□□□ -0.9
CTNND1-208ENST00000428599 ADA2Q9NZK5 511 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 PCSK1NQ9UHG2 260 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 TRAF3IP3Q9Y228 551 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 COPG1Q9Y678 874 aaKnown RBP9.44□□□□□ -0.9
CTNND1-208ENST00000428599 FRMD3A2A2Y4 597 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 POTEMA6NI47 508 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 LRRIQ3A6PVS8 624 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-208ENST00000428599 PSMD14O00487 310 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 GYG2O15488 501 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 EFNA5P52803 228 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 ABCE1P61221 599 aaKnown RBP9.44□□□□□ -0.9
CTNND1-208ENST00000428599 FAM102AQ5T9C2 384 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-208ENST00000428599 C16orf87Q6PH81 154 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 TRIM72Q6ZMU5 477 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 FLT1P17948 1338 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 RASA4BC9J798 803 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 APOL1O14791 398 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 RASA4O43374 803 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 NDUFA10O95299 355 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 GUCA1CO95843 209 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 KITP10721 976 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 CDC27P30260 824 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 TPI1P60174 286 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 MTMR2Q13614 643 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 TRADDQ15628 312 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 ENOSF1Q7L5Y1 443 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 PROM2Q8N271 834 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 TMEM161AQ9NX61 479 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 PSD3Q9NYI0 1048 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 MAD2L2Q9UI95 211 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 F5H423 210 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-208ENST00000428599 NR1D1P20393 614 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 VAMP7P51809 220 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 HPCAP84074 193 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 NUGGCQ68CJ6 796 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 GRAMD4Q6IC98 578 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 GPD1LQ8N335 351 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 MUC3BQ9H195 1237 aa9.44□□□□□ -0.9
CTNND1-208ENST00000428599 ATP5HO75947 161 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 PPP3CCP48454 512 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 SULT1E1P49888 294 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 ZNF157P51786 506 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-208ENST00000428599 RCAN1P53805 252 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 MAP3K7CLP57077 242 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 EPM2AIP1Q7L775 607 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-208ENST00000428599 PPM1NQ8N819 430 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 MTA3Q9BTC8 594 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 SLC9A2Q9UBY0 812 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 FAM32AQ9Y421 112 aaKnown RBP9.43□□□□□ -0.9
CTNND1-208ENST00000428599 CCDC195A0A1B0GUA6 201 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 LRRC53A6NM62 1247 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 C11orf57Q6ZUT1 292 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-208ENST00000428599 TRIM48Q8IWZ4 208 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 TDRD7Q8NHU6 1098 aaKnown RBP9.43□□□□□ -0.9
CTNND1-208ENST00000428599 GTF3C2Q8WUA4 911 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-208ENST00000428599 RAD54LQ92698 747 aa9.43□□□□□ -0.9
CTNND1-208ENST00000428599 NUP85Q9BW27 656 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms