RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 RBM15Q96T37 977 aaKnown RBP eCLIP11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 TRABDQ9H4I3 376 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 ZFP69BQ9UJL9 534 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 SLIT2O94813 1529 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 PLIN4Q96Q06 1357 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 HNRNPCL1O60812 293 aaKnown RBP11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 CALB2P22676 271 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 SLC1A1P43005 524 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 BPIFB4P59827 614 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 GABPAQ06546 454 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 KLC1Q07866 573 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 C1orf186Q6ZWK4 172 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 COA1Q9GZY4 146 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 CTNNAL1Q9UBT7 734 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 SCOCQ9UIL1 159 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 CTDP1Q9Y5B0 961 aaPredicted RBP11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 ZNF335Q9H4Z2 1342 aaPredicted RBP11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 RREB1Q92766 1687 aa11.46□□□□□ -0.57
ATP2C1-204ENST00000428331 E7ENQ6 273 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 EML1O00423 815 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 LIN7AO14910 233 aaPredicted RBP11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 SHMT1P34896 483 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 NOVP48745 357 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 UBXN2AP68543 259 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 CYP1B1Q16678 543 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 TMEM179Q6ZVK1 233 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 ATG4AQ8WYN0 398 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 RNPEPL1Q9HAU8 725 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 PHTF1Q9UMS5 762 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 ACTL7BQ9Y614 415 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 WFS1O76024 890 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 TARSP26639 723 aaKnown RBP11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 TM4SF1P30408 202 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 PHBP35232 272 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 MAGEA4P43358 317 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 KRT39Q6A163 491 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 BICD1Q96G01 975 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 IQCGQ9H095 443 aaKnown RBP11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 UBN1Q9NPG3 1134 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 C1orf112Q9NSG2 853 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 ADAM22Q9P0K1 906 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 HAO1Q9UJM8 370 aa11.46□□□□□ -0.58
ATP2C1-204ENST00000428331 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 CDC25CP30307 473 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 CIITAP33076 1130 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 CDR2Q01850 454 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 CENPCQ03188 943 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 GNPTABQ3T906 1256 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 SLC30A9Q6PML9 568 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 MTFR1LQ9H019 292 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 NINJ2Q9NZG7 142 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 TRIM33Q9UPN9 1127 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 DLEC1Q9Y238 1755 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 GOLGA8IPA6NC78 632 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 GOLGA8JA6NMD2 632 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 IFNB1P01574 187 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 MUTP22033 750 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 DNAJC9Q8WXX5 260 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 POP1Q99575 1024 aaKnown RBP11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 LXNQ9BS40 222 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 IKZF4Q9H2S9 585 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 MRPL47Q9HD33 250 aaKnown RBP11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 RAB20Q9NX57 234 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 MRPL11Q9Y3B7 192 aaKnown RBP11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 A8MUI8 341 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 FSCN2O14926 492 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 ZWINTO95229 277 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 ZBTB48P10074 688 aaPredicted RBP11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 PEX5P50542 639 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 PARP6Q2NL67 630 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 SLC9A9Q8IVB4 645 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 APLFQ8IW19 511 aaPredicted RBP11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 ARHGEF19Q8IW93 802 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 CYP2W1Q8TAV3 490 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 CNKSR1Q969H4 720 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 FAXDC2Q96IV6 333 aa11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.45□□□□□ -0.58
ATP2C1-204ENST00000428331 IGKV6D-41A0A0C4DH26 115 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 TCRBV7S2A1N4TA0A589 114 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 FAM196BA6NMK8 535 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 ANKRD63C9JTQ0 380 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 SLITRK3O94933 977 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 PLS3P13797 630 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 CREB1P16220 341 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 SPIRE1Q08AE8 756 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 CCDC15Q0P6D6 951 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 BLMHQ13867 455 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 PTK6Q13882 451 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 DPY19L2P1Q6NXN4 242 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 EPS8L1Q8TE68 723 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 STK32AQ8WU08 396 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 HSPBP1Q9NZL4 362 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 ATF7P17544 494 aaPredicted RBP11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 MARK3P27448 753 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 CTCFP49711 727 aaPredicted RBP11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 ACAD10Q6JQN1 1059 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 VSTM1Q6UX27 236 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 RHOT1Q8IXI2 618 aa11.44□□□□□ -0.58
ATP2C1-204ENST00000428331 SCYL3Q8IZE3 742 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms