RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 MYOGP15173 224 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 PBX2P40425 430 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 STX17P56962 302 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 FKBP3Q00688 224 aaKnown RBP16.46■□□□□ 0.23
VARS2-203ENST00000428017 TPD52L1Q16890 204 aaPredicted RBP16.46■□□□□ 0.23
VARS2-203ENST00000428017 SLC10A6Q3KNW5 377 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 CT47A1Q5JQC4 288 aaPredicted RBP16.46■□□□□ 0.23
VARS2-203ENST00000428017 ANKRD40Q6AI12 368 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 CBWD2Q8IUF1 395 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 SP7Q8TDD2 431 aaPredicted RBP16.46■□□□□ 0.23
VARS2-203ENST00000428017 TMEM174Q8WUU8 243 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 TSPAN18Q96SJ8 248 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 NKX2-4Q9H2Z4 354 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 SLC28A3Q9HAS3 691 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 RC3H2Q9HBD1 1191 aaKnown RBP16.46■□□□□ 0.23
VARS2-203ENST00000428017 AAASQ9NRG9 546 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 SLC38A7Q9NVC3 462 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 DMAC2Q9NW81 257 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 CNTN3Q9P232 1028 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 RWDD2AQ9UIY3 292 aa16.46■□□□□ 0.23
VARS2-203ENST00000428017 YBX2Q9Y2T7 364 aaKnown RBP16.46■□□□□ 0.23
VARS2-203ENST00000428017 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.46■□□□□ 0.23
VARS2-203ENST00000428017 SMIM28A0A1B0GU29 152 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 SYCE3A1L190 88 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 TRIM49BA6NDI0 452 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 LACTBL1A8MY62 500 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 INPPL1O15357 1258 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 XPOTO43592 962 aaKnown RBP16.45■□□□□ 0.22
VARS2-203ENST00000428017 FGFR1OPO95684 399 aaKnown RBP16.45■□□□□ 0.22
VARS2-203ENST00000428017 DNAJB2P25686 324 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 PSMC2P35998 433 aaKnown RBP16.45■□□□□ 0.22
VARS2-203ENST00000428017 PMS1P54277 932 aaKnown RBP16.45■□□□□ 0.22
VARS2-203ENST00000428017 TYRO3Q06418 890 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 SURF1Q15526 300 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 GLRA4Q5JXX5 417 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 PPP2R2DQ66LE6 453 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 CRELD2Q6UXH1 353 aaPredicted RBP16.45■□□□□ 0.22
VARS2-203ENST00000428017 USP37Q86T82 979 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 BRSK2Q8IWQ3 736 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 CSGALNACT2Q8N6G5 542 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 ZSWIM2Q8NEG5 633 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 TIFAQ96CG3 184 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 KIF12Q96FN5 646 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 FBXL18Q96ME1 805 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 FNBP1Q96RU3 617 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 NAT10Q9H0A0 1025 aaKnown RBP16.45■□□□□ 0.22
VARS2-203ENST00000428017 ASB7Q9H672 318 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 RWDD3Q9Y3V2 267 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 MRPL42Q9Y6G3 142 aaKnown RBP16.45■□□□□ 0.22
VARS2-203ENST00000428017 TTC3P53804 2025 aa16.45■□□□□ 0.22
VARS2-203ENST00000428017 TTC26A0AVF1 554 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 CARNS1A5YM72 827 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 ZC3H11AO75152 810 aaKnown RBP eCLIP16.44■□□□□ 0.22
VARS2-203ENST00000428017 EPB41P11171 864 aaKnown RBP16.44■□□□□ 0.22
VARS2-203ENST00000428017 KRT13P13646 458 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 KCNE1P15382 129 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 LAG3P18627 525 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 ERCC5P28715 1186 aaPredicted RBP16.44■□□□□ 0.22
VARS2-203ENST00000428017 ALDH7A1P49419 539 aaKnown RBP16.44■□□□□ 0.22
VARS2-203ENST00000428017 AFF1P51825 1210 aaKnown RBP16.44■□□□□ 0.22
VARS2-203ENST00000428017 TMEM132DQ14C87 1099 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 ZSCAN23Q3MJ62 389 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 XKR4Q5GH76 650 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 FOXR2Q6PJQ5 311 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 ALKAL1Q6UXT8 129 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 CCDC127Q96BQ5 260 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 PCDHB12Q9Y5F1 795 aa16.44■□□□□ 0.22
VARS2-203ENST00000428017 LINC01553A4QN01 128 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 PTGESO14684 152 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 SPAG1Q07617 926 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 CYP24A1Q07973 514 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 TUSC3Q13454 348 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 JADE1Q6IE81 842 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 TTI2Q6NXR4 508 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 FAM186BQ8IYM0 893 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 GSTCDQ8NEC7 633 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 CACTINQ8WUQ7 758 aaKnown RBP16.43■□□□□ 0.22
VARS2-203ENST00000428017 EEF2KMTQ96G04 330 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 CEP63Q96MT8 703 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 ZNF558Q96NG5 402 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 SAMD11Q96NU1 681 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 TGS1Q96RS0 853 aaKnown RBP16.43■□□□□ 0.22
VARS2-203ENST00000428017 MIOSQ9NXC5 875 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
VARS2-203ENST00000428017 DERAQ9Y315 318 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 C2CD2Q9Y426 696 aa16.43■□□□□ 0.22
VARS2-203ENST00000428017 MAPK13O15264 365 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 SLC16A3O15427 465 aaKnown RBP16.42■□□□□ 0.22
VARS2-203ENST00000428017 AKAP3O75969 853 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 ALDH2P05091 517 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 ADRB2P07550 413 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 DLATP10515 647 aaKnown RBP16.42■□□□□ 0.22
VARS2-203ENST00000428017 CTNNB1P35222 781 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 CASP4P49662 377 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 TFAMQ00059 246 aaKnown RBP16.42■□□□□ 0.22
VARS2-203ENST00000428017 TAP1Q03518 808 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 PSMD6Q15008 389 aa16.42■□□□□ 0.22
VARS2-203ENST00000428017 LRRC55Q6ZSA7 311 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms