RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OR2W6PQ8NHA6 318 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 UCMAQ8WVF2 138 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 APPBP2Q92624 585 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 VTI1AQ96AJ9 217 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 SNF8Q96H20 258 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 CCDC85AQ96PX6 553 aaPredicted RBP5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 MED15Q96RN5 788 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 RIOK1Q9BRS2 568 aaKnown RBP5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 FAM96AQ9H5X1 160 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 DENND2DQ9H6A0 471 aaPredicted RBP5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 KCNK9Q9NPC2 374 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 DIABLOQ9NR28 239 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 METTL5Q9NRN9 209 aaKnown RBP5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 ARHGAP20Q9P2F6 1191 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 ANKFY1Q9P2R3 1169 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 NKX1-2Q9UD57 310 aaPredicted RBP5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 RSL24D1Q9UHA3 163 aaKnown RBP5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 LGALS13Q9UHV8 139 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF180Q9UJW8 692 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 DNAJC12Q9UKB3 198 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 AMFRQ9UKV5 643 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 SORCS3Q9UPU3 1222 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 MAPK8IP1Q9UQF2 711 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 EFR3BQ9Y2G0 817 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 GIT1Q9Y2X7 761 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 TELO2Q9Y4R8 837 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 PCDHB2Q9Y5E7 798 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 AK5Q9Y6K8 562 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 IKBKGQ9Y6K9 419 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 C10orf71Q711Q0 1435 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 PTPRUQ92729 1446 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 PFASO15067 1338 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 MAST3O60307 1309 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 MAP3K19Q56UN5 1328 aa5.96□□□□□ -1.46
VTI1BP4-201ENST00000427516 SETD1BQ9UPS6 1966 aaKnown RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 A8MUI8 341 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTC34A8MYJ7 566 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 CENPBD1B2RD01 187 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 CASQ2O14958 399 aaPredicted RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 XPO1O14980 1071 aaKnown RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 PRPF4O43172 522 aaKnown RBP eCLIP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 RIPK2O43353 540 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 DNAJC6O75061 913 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TRMUO75648 421 aaKnown RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ATRNO75882 1429 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 UBTFL6P0CB48 400 aaPredicted RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ESRRAP11474 423 aaPredicted RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 MUTP22033 750 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 IL15P40933 162 aaPredicted RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TXKP42681 527 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 PRCPP42785 496 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZBTB16Q05516 673 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 CDK18Q07002 472 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 KLHL30Q0D2K2 578 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 KCNMA1Q12791 1236 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TRIM32Q13049 653 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 MAPK7Q13164 816 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 MTHFSDQ2M296 383 aaKnown RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TRIM71Q2Q1W2 868 aaKnown RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 MMEL1Q495T6 779 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ANKRD20A4Q4UJ75 823 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF394Q53GI3 561 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TMEM67Q5HYA8 995 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTC38Q5R3I4 469 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TMCO4Q5TGY1 634 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 FOXB2Q5VYV0 432 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 DUPD1Q68J44 220 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 NXNQ6DKJ4 435 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTI2Q6NXR4 508 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 PDXDC2PQ6P474 469 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 POTEAQ6S8J7 498 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 MIGA2Q7L4E1 593 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 GET4Q7L5D6 327 aaPredicted RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ECHDC2Q86YB7 292 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 TMPRSS6Q8IU80 811 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC15A3Q8IY34 581 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 SCYL3Q8IZE3 742 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 MDM1Q8TC05 714 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ACMSDQ8TDX5 336 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 SNX29Q8TEQ0 813 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 RASSF5Q8WWW0 418 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 GAB3Q8WWW8 586 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 LPIN2Q92539 896 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 RPGRQ92834 1020 aaKnown RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ALKBH8Q96BT7 664 aaKnown RBP5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 DYDC2Q96IM9 177 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 NSL1Q96IY1 281 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 AGBL1Q96MI9 1066 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 PSMB7Q99436 277 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 NACAP1Q9BZK3 213 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 KLHL4Q9C0H6 718 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 NDEL1Q9GZM8 345 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 MYLK2Q9H1R3 596 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 CAAP1Q9H8G2 361 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 MMRN2Q9H8L6 949 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC38A10Q9HBR0 1119 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 AAASQ9NRG9 546 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 VPS45Q9NRW7 570 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 AGPAT5Q9NUQ2 364 aa5.95□□□□□ -1.46
VTI1BP4-201ENST00000427516 ETNK2Q9NVF9 386 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms