RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 MAP7D2Q96T17 732 aa19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 INO80BQ9C086 356 aaPredicted RBP19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 APEX2Q9UBZ4 518 aa19.44■□□□□ 0.7
AC055811.2-201ENST00000427497 A0A087WZ62 844 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 SSU72P8A0A1W2PR75 194 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 EIF3CLB5ME19 914 aaKnown RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 KIAA0355O15063 1070 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 PLEKP08567 350 aaPredicted RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 IQCF3P0C7M6 154 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 RFX1P22670 979 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 ITGB8P26012 769 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 ACOT2P49753 483 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 PURAQ00577 322 aaKnown RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 FAAP100Q0VG06 881 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 KRT39Q6A163 491 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 NFRKBQ6P4R8 1299 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 POP1Q99575 1024 aaKnown RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 EIF3CQ99613 913 aaKnown RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 FDXACB1Q9BRP7 624 aaPredicted RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 KATNAL1Q9BW62 490 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 PRMT7Q9NVM4 692 aaPredicted RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 DCDC2CA8MYV0 355 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 KPNA6O60684 536 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 TUBB4AP04350 444 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 SERPING1P05155 500 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 MATR3P43243 847 aaKnown RBP eCLIP19.43■□□□□ 0.71e-7■■□□□ 11.4
AC055811.2-201ENST00000427497 CDK7P50613 346 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 GPC3P51654 580 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 PRPF4BQ13523 1007 aaKnown RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 RAPGEF1Q13905 1077 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 AMHR2Q16671 573 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 ASTE1Q2TB18 679 aaPredicted RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 ZBTB41Q5SVQ8 909 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 ATF7IP2Q5U623 682 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 GJB7Q6PEY0 223 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 C15orf39Q6ZRI6 1047 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 ZNF410Q86VK4 478 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 VTI1AQ96AJ9 217 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 SPAG5Q96R06 1193 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 TOPORSQ9NS56 1045 aaPredicted RBP19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 TMEM39AQ9NV64 488 aa19.43■□□□□ 0.7
AC055811.2-201ENST00000427497 SMIM35A0A1B0GVV1 85 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 OGTO15294 1046 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 B4GALT5O43286 388 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 LCA5LO95447 670 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 HOXC8P31273 242 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 EIF4A3P38919 411 aaKnown RBP19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 WNT7BP56706 349 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 HIC1Q14526 733 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 PHLDB3Q6NSJ2 640 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 MPZL3Q6UWV2 235 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 IRF2BP2Q7Z5L9 587 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 PRIMPOLQ96LW4 560 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 CCDC42Q96M95 316 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 STK33Q9BYT3 514 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 RBAKQ9NYW8 714 aaPredicted RBP19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 DNAJC12Q9UKB3 198 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 TNFSF13BQ9Y275 285 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 MROH7Q68CQ1 1323 aa19.42■□□□□ 0.7
AC055811.2-201ENST00000427497 A0A0U1RQG5 324 aaPredicted RBP19.41■□□□□ 0.7
AC055811.2-201ENST00000427497 ZEB2O60315 1214 aa19.41■□□□□ 0.7
AC055811.2-201ENST00000427497 DLATP10515 647 aaKnown RBP19.41■□□□□ 0.7
AC055811.2-201ENST00000427497 RAG1P15918 1043 aa19.41■□□□□ 0.7
AC055811.2-201ENST00000427497 ASIC2Q16515 512 aa19.41■□□□□ 0.7
AC055811.2-201ENST00000427497 SV2AQ7L0J3 742 aa19.41■□□□□ 0.7
AC055811.2-201ENST00000427497 ZNF516Q92618 1163 aa19.41■□□□□ 0.7
AC055811.2-201ENST00000427497 CNTNAP2Q9UHC6 1331 aa19.41■□□□□ 0.7
AC055811.2-201ENST00000427497 A0A0U1RQJ8 604 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 ARVCFO00192 962 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 PRKCIP41743 596 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 KIF11P52732 1056 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 ETF1P62495 437 aaKnown RBP19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 KRT83P78385 493 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 CDC42EP1Q00587 391 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 SHHQ15465 462 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 EEF1DP3Q658K8 133 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 ZNF662Q6ZS27 426 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 SRGAP1Q7Z6B7 1085 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 ZBTB33Q86T24 672 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 BRSK2Q8IWQ3 736 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 FBXL13Q8NEE6 735 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 ATRIPQ8WXE1 791 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 SEMA4DQ92854 862 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 FNBP1Q96RU3 617 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 TCHPQ9BT92 498 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 ADAMTS10Q9H324 1103 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 PDE11AQ9HCR9 933 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 COL6A3P12111 3177 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 SCN10AQ9Y5Y9 1956 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 F8VZ95 297 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 ZNF263O14978 683 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 LRRN2O75325 713 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 ARHGAP25P42331 645 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 CHMP4BP1P59074 171 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 C9orf50Q5SZB4 431 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 CXCL17Q6UXB2 119 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 DEFB123Q8N688 67 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 NLRP7Q8WX94 980 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 PPP1R16BQ96T49 567 aa19.4■□□□□ 0.7
AC055811.2-201ENST00000427497 CGRRF1Q99675 332 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms