RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 H2AFZP0C0S5 128 aa28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 IQCF3P0C7M6 154 aa28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 PIK3CAP42336 1068 aa28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 H2AFVQ71UI9 128 aa28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 ENOSF1Q7L5Y1 443 aa28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 HHIPL1Q96JK4 782 aa28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 FDXACB1Q9BRP7 624 aaPredicted RBP28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 C1orf112Q9NSG2 853 aa28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 CPSF3Q9UKF6 684 aaKnown RBP28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 TNFSF13BQ9Y275 285 aa28.69■■■□□ 2.18
SH3GL3-202ENST00000427482 F2P00734 622 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 VTNP04004 478 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 USP8P40818 1118 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 NAP1L1P55209 391 aaKnown RBP28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 BIRC3Q13489 604 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 ZNF568Q3ZCX4 644 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 SLC20A1Q8WUM9 679 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 UBXN4Q92575 508 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 ZIC5Q96T25 663 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 PCDHGC5Q9Y5F6 944 aa28.68■■■□□ 2.18
SH3GL3-202ENST00000427482 CA12O43570 354 aa28.67■■■□□ 2.18
SH3GL3-202ENST00000427482 TFRCP02786 760 aaKnown RBP28.67■■■□□ 2.18
SH3GL3-202ENST00000427482 EEF1DP3Q658K8 133 aa28.67■■■□□ 2.18
SH3GL3-202ENST00000427482 RSRC2Q7L4I2 434 aaKnown RBP28.67■■■□□ 2.18
SH3GL3-202ENST00000427482 DNAAF5Q86Y56 855 aa28.67■■■□□ 2.18
SH3GL3-202ENST00000427482 LENG1Q96BZ8 264 aaPredicted RBP28.67■■■□□ 2.18
SH3GL3-202ENST00000427482 MAP7D2Q96T17 732 aa28.67■■■□□ 2.18
SH3GL3-202ENST00000427482 RRN3P2A6NIE6 340 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 CTGFP29279 349 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 AP3M2P53677 418 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 RBM10P98175 930 aaKnown RBP28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 AMHR2Q16671 573 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 TMEM132AQ24JP5 1023 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 WDR44Q5JSH3 913 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 WDR49Q8IV35 697 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 SMC1BQ8NDV3 1235 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 OR5B17Q8NGF7 314 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 ELMO3Q96BJ8 720 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 SGPL1O95470 568 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 SURF1Q15526 300 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 EPS8L1Q8TE68 723 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 KAT2BQ92831 832 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 PPP1R16BQ96T49 567 aa28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 GPBP1L1Q9HC44 474 aaPredicted RBP28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 PUF60Q9UHX1 559 aaKnown RBP28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 NOCTQ9UK39 431 aaKnown RBP28.66■■■□□ 2.18
SH3GL3-202ENST00000427482 A0A0A6YYK5 440 aaPredicted RBP28.65■■■□□ 2.18
SH3GL3-202ENST00000427482 CYP26A1O43174 497 aa28.65■■■□□ 2.18
SH3GL3-202ENST00000427482 ZEB2O60315 1214 aa28.65■■■□□ 2.18
SH3GL3-202ENST00000427482 CHMP4BP1P59074 171 aa28.65■■■□□ 2.18
SH3GL3-202ENST00000427482 KIAA0319LQ8IZA0 1049 aa28.65■■■□□ 2.18
SH3GL3-202ENST00000427482 CDT1Q9H211 546 aa28.65■■■□□ 2.18
SH3GL3-202ENST00000427482 SNX12Q9UMY4 172 aa28.65■■■□□ 2.18
SH3GL3-202ENST00000427482 Q9Y3F1 56 aa28.65■■■□□ 2.18
SH3GL3-202ENST00000427482 TMEM88BA6NKF7 163 aa28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 KIF3CO14782 793 aa28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 GALCP54803 685 aa28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 NOP9Q86U38 636 aaKnown RBP28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 PALB2Q86YC2 1186 aa28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 LMBR1Q8WVP7 490 aa28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 GOLGA1Q92805 767 aa28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 SEPT11Q9NVA2 429 aaKnown RBP28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 SETD4Q9NVD3 440 aa28.64■■■□□ 2.18
SH3GL3-202ENST00000427482 PALMO75781 387 aa28.64■■■□□ 2.17
SH3GL3-202ENST00000427482 PRLRP16471 622 aa28.64■■■□□ 2.17
SH3GL3-202ENST00000427482 RPUSD2Q8IZ73 545 aaKnown RBP28.64■■■□□ 2.17
SH3GL3-202ENST00000427482 DHX38Q92620 1227 aaKnown RBP28.64■■■□□ 2.17
SH3GL3-202ENST00000427482 SRGAP2O75044 1071 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 SMIM10L2AP0DMW4 78 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 SMIM10L2BP0DMW5 78 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 CPT1AP50416 773 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 SLC47A2Q86VL8 602 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 CDR2LQ86X02 465 aaPredicted RBP28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 THNSL1Q8IYQ7 743 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 NLRP7Q8WX94 980 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 NCANO14594 1321 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 NRCAMQ92823 1304 aa28.63■■■□□ 2.17
SH3GL3-202ENST00000427482 GRID2IPA4D2P6 1211 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 CSDE1O75534 798 aaKnown RBP28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 TMEM253P0C7T8 217 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 CHRNB2P17787 502 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 IFI16Q16666 785 aaKnown RBP28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 NFRKBQ6P4R8 1299 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 ZNF410Q86VK4 478 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 TMCO5BA8MYB1 307 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 PHACTR2O75167 634 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 IRX5P78411 483 aaPredicted RBP28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 NCOA4Q13772 614 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 MFSD10Q14728 455 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 TEX35Q5T0J7 233 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 CEP120Q8N960 986 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 TLR10Q9BXR5 811 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 AP5M1Q9H0R1 490 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 APOBEC3GQ9HC16 384 aaKnown RBP28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 TAS2R14Q9NYV8 317 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 TSKSQ9UJT2 592 aa28.62■■■□□ 2.17
SH3GL3-202ENST00000427482 CTAGE15A4D2H0 777 aa28.61■■■□□ 2.17
SH3GL3-202ENST00000427482 GPR25O00155 361 aa28.61■■■□□ 2.17
SH3GL3-202ENST00000427482 CTAGE8P0CG41 777 aa28.61■■■□□ 2.17
SH3GL3-202ENST00000427482 MCF2P10911 925 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms