RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 PON2Q15165 354 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 TARBP2Q15633 366 aaKnown RBP10.29□□□□□ -0.76
LSG1-202ENST00000427461 MTERF2Q49AM1 385 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 PRSS36Q5K4E3 855 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 TYW1BQ6NUM6 668 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 HEATR3Q7Z4Q2 680 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 CTCFLQ8NI51 663 aaPredicted RBP10.29□□□□□ -0.76
LSG1-202ENST00000427461 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 ZNF577Q9BSK1 485 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 DSCC1Q9BVC3 393 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 APOL6Q9BWW8 343 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 EIF2AQ9BY44 585 aaKnown RBP10.29□□□□□ -0.76
LSG1-202ENST00000427461 MINDY3Q9H8M7 445 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 IFT122Q9HBG6 1241 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 SUCLA2Q9P2R7 463 aaPredicted RBP10.29□□□□□ -0.76
LSG1-202ENST00000427461 IPPQ9Y573 584 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 ASXL3Q9C0F0 2248 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 KALRNO60229 2985 aa10.29□□□□□ -0.76
LSG1-202ENST00000427461 CACNA1EQ15878 2313 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 KIF26AQ9ULI4 1882 aaPredicted RBP10.28□□□□□ -0.76
LSG1-202ENST00000427461 WDR27A2RRH5 827 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 FAM221BA6H8Z2 402 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 NR1I2O75469 434 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 SMARCA1P28370 1054 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 OR1D2P34982 312 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 SREBF1P36956 1147 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 KPNA1P52294 538 aaPredicted RBP10.28□□□□□ -0.76
LSG1-202ENST00000427461 IRX4P78413 519 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 CCINQ13939 588 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 DGKKQ5KSL6 1271 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 FAM171A1Q5VUB5 890 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 NIPA1Q7RTP0 329 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 ZNF410Q86VK4 478 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 RAB11FIP4Q86YS3 637 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 SMAP1Q8IYB5 467 aaPredicted RBP10.28□□□□□ -0.76
LSG1-202ENST00000427461 ZNF654Q8IZM8 581 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 GSTCDQ8NEC7 633 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 MDM1Q8TC05 714 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 CSGALNACT1Q8TDX6 532 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 PIK3R5Q8WYR1 880 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 RSPRY1Q96DX4 576 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 CORO1BQ9BR76 489 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 TTPALQ9BTX7 342 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 TCEAL9Q9UHQ7 104 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 RAXQ9Y2V3 346 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 TAF6LQ9Y6J9 622 aa10.28□□□□□ -0.76
LSG1-202ENST00000427461 PLXNB3Q9ULL4 1909 aa10.27□□□□□ -0.76
LSG1-202ENST00000427461 IGKV6-21A0A0C4DH24 114 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 KHNYNO15037 678 aaKnown RBP10.27□□□□□ -0.77
LSG1-202ENST00000427461 AKAP3O75969 853 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 GJA1P17302 382 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 PTPN2P17706 415 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 FAM193AP78312 1265 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 CDC42EP1Q00587 391 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 RAB33AQ14088 237 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 IGDCC4Q8TDY8 1250 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 SMARCD2Q92925 531 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 HNRNPABQ99729 332 aaKnown RBP10.27□□□□□ -0.77
LSG1-202ENST00000427461 IL25Q9H293 177 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 UBN1Q9NPG3 1134 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 AVENQ9NQS1 362 aaPredicted RBP10.27□□□□□ -0.77
LSG1-202ENST00000427461 TBC1D22BQ9NU19 505 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 SNTG2Q9NY99 539 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 SEPT9Q9UHD8 586 aaPredicted RBP10.27□□□□□ -0.77
LSG1-202ENST00000427461 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
LSG1-202ENST00000427461 INVSQ9Y283 1065 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 PCDHB15Q9Y5E8 787 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 ABCA7Q8IZY2 2146 aa10.27□□□□□ -0.77
LSG1-202ENST00000427461 CCDC163A0A0D9SF12 145 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 HEPACAM2A8MVW5 462 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 MEFVO15553 781 aaPredicted RBP10.26□□□□□ -0.77
LSG1-202ENST00000427461 STBD1O95210 358 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 AKAP5P24588 427 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 CTHP32929 405 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 DNM2P50570 870 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 ANTXR2P58335 489 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 TRDNQ13061 729 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 HSP90AA2PQ14568 343 aaPredicted RBP10.26□□□□□ -0.77
LSG1-202ENST00000427461 ELF2Q15723 593 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 ANKRD45Q5TZF3 282 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 WWC2Q6AWC2 1192 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 TICAM2Q86XR7 235 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 MFSD6LQ8IWD5 586 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 HS6ST3Q8IZP7 471 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 DEPDC1BQ8WUY9 529 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 ZFYVE19Q96K21 471 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 HHIPQ96QV1 700 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 SLC32A1Q9H598 525 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 CCDC86Q9H6F5 360 aaKnown RBP10.26□□□□□ -0.77
LSG1-202ENST00000427461 RIC8AQ9NPQ8 531 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 DISC1Q9NRI5 854 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 GTSE1Q9NYZ3 720 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 KLK14Q9P0G3 267 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 RAI2Q9Y5P3 530 aa10.26□□□□□ -0.77
LSG1-202ENST00000427461 SF3B1O75533 1304 aaKnown RBP eCLIP10.26□□□□□ -0.77
LSG1-202ENST00000427461 THADAQ6YHU6 1953 aa10.25□□□□□ -0.77
LSG1-202ENST00000427461 MYBPHLA2RUH7 354 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms