RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 IGFBP6P24592 240 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-213ENST00000427007 CCT6AP40227 531 aaKnown RBP11.26□□□□□ -0.61
HDLBP-213ENST00000427007 GNL2Q13823 731 aaKnown RBP11.26□□□□□ -0.61
HDLBP-213ENST00000427007 ANGPT1Q15389 498 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 SPECC1Q5M775 1068 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 TTC38Q5R3I4 469 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 LIN9Q5TKA1 542 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 GPR65Q8IYL9 337 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 DTWD2Q8NBA8 298 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 PIK3R5Q8WYR1 880 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 BHMT2Q9H2M3 363 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.26□□□□□ -0.612e-16■■□□□ 14.5
HDLBP-213ENST00000427007 WNT16Q9UBV4 365 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 POLIQ9UNA4 740 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 NUMBLQ9Y6R0 609 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 COL4A3Q01955 1670 aa11.26□□□□□ -0.61
HDLBP-213ENST00000427007 TRIP11Q15643 1979 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 CLCNKBP51801 687 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 HTR4Q13639 388 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 PPP2R5AQ15172 486 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 DCAF4L1Q3SXM0 396 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 PPM1LQ5SGD2 360 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 NT5DC1Q5TFE4 455 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 ATF7IP2Q5U623 682 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 HAUS3Q68CZ6 603 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 NKD2Q969F2 451 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-213ENST00000427007 NXPE3Q969Y0 559 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 IFT74Q96LB3 600 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 RPP25Q9BUL9 199 aaKnown RBP11.25□□□□□ -0.61
HDLBP-213ENST00000427007 FOXP1Q9H334 677 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-213ENST00000427007 TBC1D17Q9HA65 648 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 GOLGA2P5Q9HBQ8 144 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 KIAA1024Q9UPX6 916 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 DOCK6Q96HP0 2047 aa11.25□□□□□ -0.61
HDLBP-213ENST00000427007 ANHXE9PGG2 379 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 I3L4J1 428 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 DCNP07585 359 aaKnown RBP11.24□□□□□ -0.61
HDLBP-213ENST00000427007 OSTNP61366 133 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 ELAVL2Q12926 359 aaKnown RBP11.24□□□□□ -0.61
HDLBP-213ENST00000427007 ORC2Q13416 577 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-213ENST00000427007 PARM1Q6UWI2 310 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 CEP120Q8N960 986 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 SLC7A14Q8TBB6 771 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 SNX29Q8TEQ0 813 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 FGF14Q92915 247 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 ARHGEF3Q9NR81 526 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 DDX19AQ9NUU7 478 aaKnown RBP11.24□□□□□ -0.61
HDLBP-213ENST00000427007 HCFC1R1Q9NWW0 138 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 LRWD1Q9UFC0 647 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 ZFHX2Q9C0A1 2572 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-213ENST00000427007 CFAP54Q96N23 3096 aa11.24□□□□□ -0.61
HDLBP-213ENST00000427007 CCDC169A6NNP5 214 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 PP2D1A8MPX8 630 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 E9PMD0 336 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 K7ERI5 159 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 B3GAT3O94766 335 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 HNRNPA1P09651 372 aaKnown RBP eCLIP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 MUTP22033 750 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 FGFR3P22607 806 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 TKTP29401 623 aaKnown RBP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 OR1D2P34982 312 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 BRCC3P46736 316 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 FXR2P51116 673 aaKnown RBP eCLIP11.23□□□□□ -0.612e-7■■□□□ 11.5
HDLBP-213ENST00000427007 EFNA5P52803 228 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 PEX3P56589 373 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 GPC5P78333 572 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 PDXDC1Q6P996 788 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 DCLRE1AQ6PJP8 1040 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 RSPO2Q6UXX9 243 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 ADSSL1Q8N142 457 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 C4orf32Q8N8J7 132 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 C3orf58Q8NDZ4 430 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 ITFG1Q8TB96 612 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 KIFAP3Q92845 792 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 FGF13Q92913 245 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 PPP1R10Q96QC0 940 aaKnown RBP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 LLPHQ9BRT6 129 aaKnown RBP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 CDH7Q9ULB5 785 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 NOL7Q9UMY1 257 aaKnown RBP11.23□□□□□ -0.61
HDLBP-213ENST00000427007 CDY1Q9Y6F8 540 aa11.23□□□□□ -0.61
HDLBP-213ENST00000427007 TMEM189-UBE2V1I3L0A0 370 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 EIF5BO60841 1220 aaKnown RBP11.22□□□□□ -0.61
HDLBP-213ENST00000427007 XYLBO75191 536 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 LRRN2O75325 713 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 CDC25AP30304 524 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 HOXA9P31269 272 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 HMGN5P82970 282 aaKnown RBP11.22□□□□□ -0.61
HDLBP-213ENST00000427007 SOX4Q06945 474 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-213ENST00000427007 PTGDRQ13258 359 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 RAB33AQ14088 237 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 UPP1Q16831 310 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 ZNF568Q3ZCX4 644 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 MIA3Q5JRA6 1907 aa11.22□□□□□ -0.61
HDLBP-213ENST00000427007 CD300LGQ6UXG3 332 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms