RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 BEX3Q00994 111 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 SURF1Q15526 300 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 ZBTB33Q86T24 672 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 VPS36Q86VN1 386 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 FAM71AQ8IYT1 594 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 NLRP7Q8WX94 980 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 SHC3Q92529 594 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 KREMEN1Q96MU8 473 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 UPF3AQ9H1J1 476 aaKnown RBP16.42■□□□□ 0.22
ACTB-204ENST00000425660 CDT1Q9H211 546 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 ADAMTS10Q9H324 1103 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 NAGPAQ9UK23 515 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 DUSP10Q9Y6W6 482 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 CASP8AP2Q9UKL3 1982 aa16.42■□□□□ 0.22
ACTB-204ENST00000425660 GPR32O75388 356 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 HARSP12081 509 aaKnown RBP16.41■□□□□ 0.22
ACTB-204ENST00000425660 MFAP3P55082 362 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 HIC1Q14526 733 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 PCBP1Q15365 356 aaKnown RBP eCLIP16.41■□□□□ 0.225e-27■■■■■ 34.2
ACTB-204ENST00000425660 ARHGAP44Q17R89 818 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 SEZ6Q53EL9 994 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 EEF1DP3Q658K8 133 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 ENOSF1Q7L5Y1 443 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 SLC35F6Q8N357 371 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 PPM1KQ8N3J5 372 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 SLC30A5Q8TAD4 765 aa16.41■□□□□ 0.22
ACTB-204ENST00000425660 VNN1O95497 513 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 MYL3P08590 195 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 MCF2P10911 925 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 ARF4P18085 180 aaPredicted RBP16.4■□□□□ 0.22
ACTB-204ENST00000425660 NAB2Q15742 525 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 ENOX2Q16206 610 aaKnown RBP16.4■□□□□ 0.22
ACTB-204ENST00000425660 KAT5Q92993 513 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.4■□□□□ 0.22
ACTB-204ENST00000425660 PDZD7Q9H5P4 517 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 UQCRHLA0A096LP55 91 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 A0A1B0GUA9 196 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 DDX3XO00571 662 aaKnown RBP eCLIP16.4■□□□□ 0.221e-323■□□□□ 8.9
ACTB-204ENST00000425660 CTIFO43310 598 aaKnown RBP16.4■□□□□ 0.22
ACTB-204ENST00000425660 B4GALT4O60513 344 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 TSPAN1O60635 241 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 CSDE1O75534 798 aaKnown RBP16.4■□□□□ 0.22
ACTB-204ENST00000425660 UQCRHP07919 91 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 MAP2K2P36507 400 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 LMBRD2Q68DH5 695 aaPredicted RBP16.4■□□□□ 0.22
ACTB-204ENST00000425660 ZNF710Q8N1W2 664 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 OR5B17Q8NGF7 314 aa16.4■□□□□ 0.22
ACTB-204ENST00000425660 SECISBP2LQ93073 1101 aaKnown RBP16.4■□□□□ 0.22
ACTB-204ENST00000425660 CTAGE9A4FU28 777 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 MYADML2A6NDP7 307 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 BTNL10A8MVZ5 291 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 GPR25O00155 361 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 HLA-DRAP01903 254 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 C6orf222P0C671 652 aaPredicted RBP16.39■□□□□ 0.21
ACTB-204ENST00000425660 CYP2C9P11712 490 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 HSPA6P17066 643 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 CACNB2Q08289 660 aaPredicted RBP16.39■□□□□ 0.21
ACTB-204ENST00000425660 KYAT1Q16773 422 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 ALKBH5Q6P6C2 394 aaKnown RBP16.39■□□□□ 0.21
ACTB-204ENST00000425660 RNF10Q8N5U6 811 aaKnown RBP16.39■□□□□ 0.21
ACTB-204ENST00000425660 FAM84AQ96KN4 292 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 PPP1R16BQ96T49 567 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 C1orf112Q9NSG2 853 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
ACTB-204ENST00000425660 URI1O94763 535 aaPredicted RBP16.38■□□□□ 0.21
ACTB-204ENST00000425660 ERLIN2O94905 339 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 GNAT1P11488 350 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 PIK3CAP42336 1068 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 BIRC3Q13489 604 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 TMEM132AQ24JP5 1023 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 KIZQ2M2Z5 673 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 GNASQ5JWF2 1037 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 RUFY4Q6ZNE9 571 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 THNSL1Q8IYQ7 743 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 CEP120Q8N960 986 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 TATDN2Q93075 761 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 SCLT1Q96NL6 688 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 NAPGQ99747 312 aaPredicted RBP16.38■□□□□ 0.21
ACTB-204ENST00000425660 GCOM2Q9BZD3 368 aaPredicted RBP16.38■□□□□ 0.21
ACTB-204ENST00000425660 INTUQ9ULD6 942 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 MRFAP1Q9Y605 127 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 C17orf102A2RUQ5 167 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 TREHO43280 583 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 ADAMTS4O75173 837 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 IL18RAPO95256 599 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 CLTAP09496 248 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 RARBP10826 455 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 TUBB2AQ13885 445 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 DUOXA2Q1HG44 320 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 WDR44Q5JSH3 913 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 SMYD5Q6GMV2 418 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 CDR2LQ86X02 465 aaPredicted RBP16.38■□□□□ 0.21
ACTB-204ENST00000425660 LNX1Q8TBB1 728 aaPredicted RBP16.38■□□□□ 0.21
ACTB-204ENST00000425660 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
ACTB-204ENST00000425660 PI4K2AQ9BTU6 479 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 TUBB2BQ9BVA1 445 aa16.38■□□□□ 0.21
ACTB-204ENST00000425660 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
ACTB-204ENST00000425660 SPC25Q9HBM1 224 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms