RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 GDAQ9Y2T3 454 aa19.52■□□□□ 0.72
GPC1-203ENST00000425056 ZMYND10O75800 440 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 CLCN5P51795 746 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 PSMD5Q16401 504 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 KRT79Q5XKE5 535 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 APBB1IPQ7Z5R6 666 aaPredicted RBP19.51■□□□□ 0.71
GPC1-203ENST00000425056 DAW1Q8N136 415 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 LNX1Q8TBB1 728 aaPredicted RBP19.51■□□□□ 0.71
GPC1-203ENST00000425056 PPP1R10Q96QC0 940 aaKnown RBP19.51■□□□□ 0.71
GPC1-203ENST00000425056 CLSTN3Q9BQT9 956 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 PIDD1Q9HB75 910 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.51■□□□□ 0.71
GPC1-203ENST00000425056 FAM86C1Q9NVL1 165 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 DNM3Q9UQ16 869 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 TNFSF13BQ9Y275 285 aa19.51■□□□□ 0.71
GPC1-203ENST00000425056 PP2D1A8MPX8 630 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 E9PMD0 336 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 K7ERI5 159 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 NPTX2P47972 431 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 RABEP1Q15276 862 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 IL17AQ16552 155 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 GLRA4Q5JXX5 417 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 PDXDC1Q6P996 788 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.5■□□□□ 0.71
GPC1-203ENST00000425056 CEP57Q86XR8 500 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 NXPE3Q969Y0 559 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 MMTAG2Q9BU76 263 aaKnown RBP19.5■□□□□ 0.71
GPC1-203ENST00000425056 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.5■□□□□ 0.71
GPC1-203ENST00000425056 ARHGAP28Q9P2N2 729 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 KIF3AQ9Y496 699 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 DOCK6Q96HP0 2047 aa19.5■□□□□ 0.71
GPC1-203ENST00000425056 CITO14578 2027 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 H0Y858 1186 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 HIP1RO75146 1068 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 HOXA9P31269 272 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 GRM5P41594 1212 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 PEX3P56589 373 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 MAPK7Q13164 816 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 DMP1Q13316 513 aaPredicted RBP19.49■□□□□ 0.71
GPC1-203ENST00000425056 GET4Q7L5D6 327 aaPredicted RBP19.49■□□□□ 0.71
GPC1-203ENST00000425056 TAS1R3Q7RTX0 852 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 KCNK18Q7Z418 384 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 RSAD2Q8WXG1 361 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 ATOH1Q92858 354 aaPredicted RBP19.49■□□□□ 0.71
GPC1-203ENST00000425056 DRC1Q96MC2 740 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 UROC1Q96N76 676 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 ACO2Q99798 780 aaKnown RBP19.49■□□□□ 0.71
GPC1-203ENST00000425056 RUSC1Q9BVN2 902 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 CDT1Q9H211 546 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 TMEM134Q9H6X4 195 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 PTPRHQ9HD43 1115 aa19.49■□□□□ 0.71
GPC1-203ENST00000425056 MYO15AQ9UKN7 3530 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 MYH11P35749 1972 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 CCDC169A6NNP5 214 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 NARSO43776 548 aaKnown RBP19.48■□□□□ 0.71
GPC1-203ENST00000425056 HNRNPA1P09651 372 aaKnown RBP eCLIP19.48■□□□□ 0.71
GPC1-203ENST00000425056 NPR3P17342 541 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 AOC1P19801 751 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 FGFR3P22607 806 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 CDC25AP30304 524 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 ZNF568Q3ZCX4 644 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 RILPL1Q5EBL4 403 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 LIN9Q5TKA1 542 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 RINT1Q6NUQ1 792 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 DTHD1Q6ZMT9 781 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 C1orf186Q6ZWK4 172 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 CEP120Q8N960 986 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 MRPL4Q9BYD3 311 aaKnown RBP19.48■□□□□ 0.71
GPC1-203ENST00000425056 C17orf75Q9HAS0 396 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 TOPORSQ9NS56 1045 aaPredicted RBP19.48■□□□□ 0.71
GPC1-203ENST00000425056 FBXL21Q9UKT6 434 aa19.48■□□□□ 0.71
GPC1-203ENST00000425056 ADAM12O43184 909 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 ST18O60284 1047 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 B3GAT3O94766 335 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 C8AP07357 584 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 LAMP2P13473 410 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 CLCNKBP51801 687 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 ATP2C1P98194 919 aaPredicted RBP19.47■□□□□ 0.71
GPC1-203ENST00000425056 UPP1Q16831 310 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 XKR4Q5GH76 650 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 HYIQ5T013 277 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 DCLRE1AQ6PJP8 1040 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 CD300LGQ6UXG3 332 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 SIX5Q8N196 739 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 FLCNQ8NFG4 579 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 TIPINQ9BVW5 301 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 CCDC94Q9BW85 323 aaPredicted RBP19.47■□□□□ 0.71
GPC1-203ENST00000425056 KMT5AQ9NQR1 393 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 MTRRQ9UBK8 725 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 WNT16Q9UBV4 365 aa19.47■□□□□ 0.71
GPC1-203ENST00000425056 RBM19Q9Y4C8 960 aaKnown RBP19.47■□□□□ 0.71
GPC1-203ENST00000425056 PDCD11Q14690 1871 aaKnown RBP19.47■□□□□ 0.71
GPC1-203ENST00000425056 VPS13AQ96RL7 3174 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 SMIM28A0A1B0GU29 152 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 ANHXE9PGG2 379 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 ABLIM1O14639 778 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 POU2F2P09086 479 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 SRFP11831 508 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 PROZP22891 400 aa19.46■□□□□ 0.71
GPC1-203ENST00000425056 IGFBP6P24592 240 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms